ENSDARG00000013596


Danio rerio

Features
Gene ID: ENSDARG00000013596
  
Biological name :brd1a
  
Synonyms : brd1a / bromodomain containing 1a
  
Possible biological names infered from orthology : BRD1 / bromodomain containing 1 / O95696
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 27130412
Gene end: 27150414
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000018937
Ensembl peptide - ENSDARP00000116486
NCBI entrez gene - 569574     See in Manteia.
RefSeq - XM_021471544
RefSeq - XM_009300454
RefSeq - XM_021475281
RefSeq - XM_692971
RefSeq - XM_021475279
RefSeq - XM_021475280
swissprot - F1QFR1
ZFIN ID - ZDB-GENE-041008-168
Ensembl - ENSDARG00000013596
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BRD1ENSGALG00000029379Gallus gallus
 BRD1ENSG00000100425Homo sapiens
 Brd1ENSMUSG00000022387Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
brd1b / bromodomain containing 1b / BRD1* / O95696* / bromodomain containing 1*ENSDARG0000005179854
brpf3b / bromodomain and PHD finger containing, 3b / BRPF3* / Q9ULD4* / bromodomain and PHD finger containing 3*ENSDARG0000007423846
brpf3a / bromodomain and PHD finger containing, 3a / BRPF3* / Q9ULD4* / bromodomain and PHD finger containing 3*ENSDARG0000007051342
brpf1 / bromodomain and PHD finger containing, 1 / P55201*ENSDARG0000010366539
jade3 / jade family PHD finger 3 / Q6IE82* / Q92613* / Protein Jade-3 *ENSDARG0000001961414
jade1 / jade family PHD finger 1 / Q6IE81* / Q6ZPI0* / Protein Jade-1 *ENSDARG0000003370714
jade2 / jade family PHD finger 2 / Q6ZQF7* / Q9NQC1* / Mus musculus jade family PHD finger 2 (Jade2), transcript variant 1, mRNA.*ENSDARG0000005338913
phf14 / PHD finger protein 14 / O94880* / Q9D4H9*ENSDARG0000006145813
mllt10 / MLLT10, histone lysine methyltransferase DOT1L cofactor / O54826* / P55197* / myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10*ENSDARG0000004540112


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR001487  Bromodomain
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019542  Enhancer of polycomb-like, N-terminal
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR034732  Extended PHD (ePHD) domain
 IPR035502  BR140-related, PWWD domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Acetylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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