ENSGALG00000029379


Gallus gallus

Features
Gene ID: ENSGALG00000029379
  
Biological name :BRD1
  
Synonyms : BRD1 / bromodomain containing 1
  
Possible biological names infered from orthology : O95696
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 18747413
Gene end: 18806394
  
Corresponding Affymetrix probe sets: Gga.1309.1.S1_at (Chicken Array)   Gga.16741.1.S1_s_at (Chicken Array)   Gga.8860.1.S1_at (Chicken Array)   GgaAffx.22617.1.S1_at (Chicken Array)   GgaAffx.22617.1.S1_s_at (Chicken Array)   GgaAffx.5379.2.S1_at (Chicken Array)   GgaAffx.5379.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044982
Ensembl peptide - ENSGALP00000052870
Ensembl peptide - ENSGALP00000052794
Ensembl peptide - ENSGALP00000047526
NCBI entrez gene - 417731     See in Manteia.
RefSeq - XM_015302591
RefSeq - XM_015302324
RefSeq - XM_015302381
RefSeq - XM_015302444
RefSeq - XM_015302496
RefSeq - XM_015302556
RefSeq - NM_001199482
RefSeq - XM_015302206
RefSeq - XM_015302269
RefSeq Peptide - NP_001186411
swissprot - A0A1D5PJ78
swissprot - A0A1D5PJ06
swissprot - A0A1D5P4B8
swissprot - A0A1D5NX89
Ensembl - ENSGALG00000029379
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 brd1aENSDARG00000013596Danio rerio
 brd1bENSDARG00000051798Danio rerio
 BRD1ENSG00000100425Homo sapiens
 Brd1ENSMUSG00000022387Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BRPF1 / bromodomain and PHD finger containing 1 / B2RRD7* / P55201* / Peregrin *ENSGALG0000003352955
BRPF3 / bromodomain and PHD finger containing 3 / Q9ULD4*ENSGALG0000000077634
JADE3 / jade family PHD finger 3 / Q6IE82* / Q92613* / Protein Jade-3 *ENSGALG0000001672717
MLLT10 / MLLT10, histone lysine methyltransferase DOT1L cofactor / O54826* / P55197* / myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10*ENSGALG0000000792815
JADE1 / jade family PHD finger 1 / Q6IE81* / Q6ZPI0* / Protein Jade-1 *ENSGALG0000001021415
PHF14 / PHD finger protein 14 / O94880* / Q9D4H9*ENSGALG0000003804115
JADE2 / jade family PHD finger 2 / Q6ZQF7* / Q9NQC1* / Mus musculus jade family PHD finger 2 (Jade2), transcript variant 1, mRNA.*ENSGALG0000000642413
MLLT6 / MLLT6, PHD finger containingENSGALG000000346939


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR001487  Bromodomain
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018359  Bromodomain, conserved site
 IPR019542  Enhancer of polycomb-like, N-terminal
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043966 histone H3 acetylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0070776 MOZ/MORF histone acetyltransferase complex IEA
 molecular_functionGO:0042393 histone binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Acetylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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