ENSDARG00000021827


Danio rerio

Features
Gene ID: ENSDARG00000021827
  
Biological name :katna1
  
Synonyms : katanin p60 (ATPase containing) subunit A 1 / katna1 / Q5RII9
  
Possible biological names infered from orthology : katanin catalytic subunit A1 / O75449
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 23860858
Gene end: 23876291
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000043315
NCBI entrez gene - 553631     See in Manteia.
swissprot - Q5RII9
ZFIN ID - ZDB-GENE-050522-514
Ensembl - ENSDARG00000021827
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KATNA1ENSGALG00000012378Gallus gallus
 KATNA1ENSG00000186625Homo sapiens
 Katna1ENSMUSG00000019794Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
katnal1 / katanin p60 subunit A-like 1 / Q9BW62* / katanin catalytic subunit A1 like 1*ENSDARG0000009915668
vps4a / vacuolar protein sorting 4a homolog A (S. cerevisiae) / Q8VEJ9* / Q9UN37* / AC026464.4* / vacuolar protein sorting 4A* / vacuolar protein sorting 4 homolog A*ENSDARG0000003011432
vps4b / vacuolar protein sorting 4b homolog B (S. cerevisiae)ENSDARG0000006917532
katnal2 / katanin p60 subunit A-like 2 / Q8IYT4* / Q9D3R6* / katanin catalytic subunit A1 like 2* / Katanin p60 ATPase-containing subunit A-like 2 *ENSDARG0000001227530
si:dkey-185p13.1 / VPS4B* / P46467* / O75351* / vacuolar protein sorting 4B* / vacuolar protein sorting 4 homolog B*ENSDARG000000958374


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR015415  Vps4 oligomerisation, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR028596  Katanin p60 subunit A1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0031122 cytoplasmic microtubule organization IMP
 biological_processGO:0048675 axon extension IMP
 biological_processGO:0051013 microtubule severing IEA
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0000922 spindle pole ISS
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005819 spindle ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0030496 midbody ISS
 cellular_componentGO:0097431 mitotic spindle pole ISS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0008568 microtubule-severing ATPase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009052 motor neuron motor neuron axon decreased length , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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