ENSDARG00000022378


Danio rerio

Features
Gene ID: ENSDARG00000022378
  
Biological name :mtmr1b
  
Synonyms : mtmr1b / myotubularin related protein 1b
  
Possible biological names infered from orthology : MTMR1 / myotubularin related protein 1 / Q13613 / Q9Z2C4
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 34088110
Gene end: 34118530
  
Corresponding Affymetrix probe sets: Dr.7782.1.A1_at (Zebrafish Array)   NM_001014330_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000037012
Ensembl peptide - ENSDARP00000137127
Ensembl peptide - ENSDARP00000123236
Ensembl peptide - ENSDARP00000113703
NCBI entrez gene - 541517     See in Manteia.
RefSeq - NM_001014330
RefSeq Peptide - NP_001014352
swissprot - E9QCN8
swissprot - A0A0R4IMW4
swissprot - E9QID3
swissprot - Q58EE0
ZFIN ID - ZDB-GENE-050327-48
Ensembl - ENSDARG00000022378
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MTMR1ENSGALG00000009085Gallus gallus
 MTMR1ENSG00000063601Homo sapiens
 Mtmr1ENSMUSG00000015214Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mtmr1a / myotubularin related protein 1a / MTMR1* / Q9Z2C4* / Q13613* / myotubularin related protein 1*ENSDARG0000005669072
mtmr2 / A0JMK5 / myotubularin related protein 2 / Q13614* / Q9Z2D1*ENSDARG0000000461657
mtm1 / myotubularin 1 / Q13496*ENSDARG0000003756048
mtmr8 / Q6TEL0 / myotubularin related protein 8 / Q96EF0*ENSDARG0000000859230
mtmr6 / myotubularin related protein 6 / Q8VE11* / Q9Y217*ENSDARG0000001679429
mtmr7a / myotubularin related protein 7a / MTMR7* / Q9Z2C9* / Q9Y216* / myotubularin related protein 7*ENSDARG0000003710128
mtmr7b / myotubularin related protein 7b / MTMR7* / Q9Z2C9* / Q9Y216* / myotubularin related protein 7*ENSDARG0000007041227
mtmr9 / myotubularin related protein 9 / Q96QG7* / Q9Z2D0*ENSDARG0000001586026
sbf2 / SET binding factor 2 / Q86WG5*ENSDARG0000005946025
zgc:154055ENSDARG0000010392425
sbf1 / SET binding factor 1 / O95248* / Q6ZPE2*ENSDARG0000006296824
mtmr3 / myotubularin related protein 3 / Q13615*ENSDARG0000009336415
mtmr3 / myotubularin related protein 3 / Q13615*ENSDARG0000009820114


Protein motifs (from Interpro)
Interpro ID Name
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR004182  GRAM domain
 IPR010569  Myotubularin-like phosphatase domain
 IPR011993  PH-like domain superfamily
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR029021  Protein-tyrosine phosphatase-like
 IPR030564  Myotubularin family
 IPR030587  Myotubularin-related protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0046856 phosphatidylinositol dephosphorylation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004438 phosphatidylinositol-3-phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA
 molecular_functionGO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of PIPs at the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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