ENSDARG00000022813


Danio rerio

Features
Gene ID: ENSDARG00000022813
  
Biological name :dnd1
  
Synonyms : dnd1 / DND microRNA-mediated repression inhibitor 1 / Q7T1H5
  
Possible biological names infered from orthology : Dead end protein homolog 1 / Q6VY05 / Q8IYX4
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 7397804
Gene end: 7409364
  
Corresponding Affymetrix probe sets: DrAffx.2.5.S1_at (Zebrafish Array)   DrAffx.2.5.S1_s_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000035017
NCBI entrez gene - 373074     See in Manteia.
swissprot - B2GPX0
swissprot - Q7T1H5
ZFIN ID - ZDB-GENE-030828-4
Ensembl - ENSDARG00000022813
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DND1ENSG00000256453Homo sapiens
 Dnd1ENSMUSG00000044595Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
a1cf / apobec1 complementation factor / Q5YD48* / Q9NQ94*ENSDARG0000000296825
rbm47 / RNA binding motif protein 47 / A0AV96* / Q91WT8* / RNA-binding protein 47 *ENSDARG0000006198525
rbm46 / RNA binding motif protein 46 / P86049* / Q8TBY0* / Probable RNA-binding protein 46 *ENSDARG0000007945225
hnrnpr / heterogeneous nuclear ribonucleoprotein R / O43390* / heteroous nuclear ribonucleoprotein R isoform a *ENSDARG0000001456921
syncrip / synaptotagmin binding, cytoplasmic RNA interacting protein / O60506* / Q7TMK9*ENSDARG0000004018419
syncripl / synaptotagmin binding, cytoplasmic RNA interacting protein, like / O60506* / Q7TMK9* / SYNCRIP* / synaptotagmin binding cytoplasmic RNA interacting protein*ENSDARG0000002672318


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034414  Dead end protein 1, RNA recognition motif 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007281 germ cell development IMP
 biological_processGO:0008354 germ cell migration IMP
 biological_processGO:0010628 positive regulation of gene expression IDA
 biological_processGO:0048255 mRNA stabilization IMP
 biological_processGO:0060047 heart contraction IMP
 biological_processGO:0060965 negative regulation of gene silencing by miRNA ISS
 biological_processGO:2000145 regulation of cell motility IMP
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0043073 germ cell nucleus IDA
 cellular_componentGO:0043186 P granule IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IPI
 molecular_functionGO:0003729 mRNA binding IDA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IDA
 molecular_functionGO:0017091 AU-rich element binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000303 female organism female organism absent , abnormal
Show

 ZFA:0000403 ovary ovary aplastic , abnormal
Show

 ZFA:0000413 gonad gonad absent , abnormal
Show

 ZFA:0000598 testis testis neoplastic , abnormal
testis aplastic/hypoplastic , abnormal
Show

 ZFA:0001094 whole organism whole organism sterile , abnormal
Show

 ZFA:0001262 gonad primordium gonad primordium lacks all parts of type germ line cell , abnormal
Show

 ZFA:0001263 ovarian follicle stage I ovarian follicle stage I aplastic , abnormal
Show

 ZFA:0001338 intestine intestine neoplastic , abnormal
Show

 ZFA:0009006 sperm sperm absent , abnormal
Show

 ZFA:0009016 germ line cell germ line cell absent , abnormal
germ line cell mislocalised , abnormal
Show

 ZFA:0009288 primordial germ cell primordial germ cell shape , abnormal
primordial germ cell lacks all parts of type primordial germ cell bleb, abnormal
primordial germ cell decreased cellular motility , abnormal
primordial germ cell cell motility decreased occurrence , abnormal
primordial germ cell decreased amount , abnormal
primordial germ cell mislocalised , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr