ENSDARG00000023203


Danio rerio

Features
Gene ID: ENSDARG00000023203
  
Biological name :mhc1lda
  
Synonyms : major histocompatibility complex class I LDA / mhc1lda
  
Possible biological names infered from orthology : 2410137M14Rik / alpha-2-glycoprotein 1, zinc-binding / AZGP1 / Fc fragment of IgG receptor and transporter / FCGRT / H2-M10.1 / H2-M10.2 / H2-M10.3 / H2-M10.4 / H2-M10.5 / H2-M10.6 / H2-T10 / H2-T22 / H2-T24 / hemochromatosis / Hereditary hemochromatosis protein homolog / HFE / histocompatibility 2, M region locus 10.2 / histocompatibility 2, M region locus 10.6 / histocompatibility 2, T region locus 10 / histocompatibility 2, T region locus 22 / major histocompatibility complex, class I-related / MHC class I polypeptide-related sequence A / MHC class I polypeptide-related sequence B / MHC I like leukocyte 2 / MICA / MICB / Mill1 / Mill2 / MR1 / Mus musculus Fc receptor, IgG, alpha chain transporter (Fcgrt), transcript variant 2, mRNA. / P25311 / P55899 / P70387 / Q29980 / Q30201 / Q61559 / Q64726 / Q8HWB0 / Q95460 / RIKEN cDNA 2410137M14 gene / Zinc-alpha-2-glycoprotein
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 10953351
Gene end: 10961324
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067873
Ensembl peptide - ENSDARP00000129125
NCBI entrez gene - 100149810     See in Manteia.
RefSeq - NM_001327909
RefSeq Peptide - NP_001314838
swissprot - F1RAH3
swissprot - X1WFX0
ZFIN ID - ZDB-GENE-140820-5
Ensembl - ENSDARG00000023203
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000043619Gallus gallus
 ENSGALG00000030320Gallus gallus
 ENSGALG00000026466Gallus gallus
 ENSGALG00000040901Gallus gallus
 ENSGALG00000035251Gallus gallus
 ENSGALG00000032602Gallus gallus
 BF1ENSGALG00000033932Gallus gallus
 BF2ENSGALG00000041380Gallus gallus
 AZGP1ENSG00000160862Homo sapiens
 FCGRTENSG00000104870Homo sapiens
 HFEENSG00000010704Homo sapiens
 MICAENSG00000204520Homo sapiens
 MICBENSG00000204516Homo sapiens
 MR1ENSG00000153029Homo sapiens
 2410137M14RikENSMUSG00000064308Mus musculus
 Azgp1ENSMUSG00000037053Mus musculus
 FcgrtENSMUSG00000003420Mus musculus
 H2-M10.1ENSMUSG00000024448Mus musculus
 H2-M10.2ENSMUSG00000023083Mus musculus
 H2-M10.3ENSMUSG00000058124Mus musculus
 H2-M10.4ENSMUSG00000048231Mus musculus
 H2-M10.5ENSMUSG00000037246Mus musculus
 H2-M10.6ENSMUSG00000037130Mus musculus
 H2-T10ENSMUSG00000079491Mus musculus
 H2-T22ENSMUSG00000056116Mus musculus
 H2-T24ENSMUSG00000053835Mus musculus
 HfeENSMUSG00000006611Mus musculus
 Mill1ENSMUSG00000054005Mus musculus
 Mill2ENSMUSG00000040987Mus musculus
 Mr1ENSMUSG00000026471Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CR339041.2 / MR1* / HFE* / MICA* / MICB* / FCGRT* / AZGP1* / P55899* / Q29980* / P25311* / Q30201* / Q95460* / hemochromatosis* / alpha-2-glycoprotein 1, zinc-binding* / MHC class I polypep...ENSDARG0000005171166
mhc1lga / major histocompatibility complex class I LGA / HFE* / MR1* / MICB* / MICA* / FCGRT* / Mill1* / Mill2* / AZGP1* / P25311* / H2-T10* / H2-T22* / H2-T24* / P55899* / P70387* / Q29980...ENSDARG0000005171362
mhc1lfa / major histocompatibility complex class I LFA / HFE* / MR1* / MICB* / MICA* / FCGRT* / Mill1* / Mill2* / AZGP1* / P25311* / H2-T10* / H2-T22* / H2-T24* / P55899* / P70387* / Q29980...ENSDARG0000005171260
mhc1lja / major histocompatibility complex class I LJA / HFE* / MR1* / MICB* / MICA* / FCGRT* / Mill1* / Mill2* / AZGP1* / P25311* / H2-T10* / H2-T22* / H2-T24* / P55899* / P70387* / Q29980...ENSDARG0000009683052
CR339041.1 / MR1* / HFE* / MICA* / MICB* / FCGRT* / AZGP1* / P55899* / Q29980* / P25311* / Q30201* / Q95460* / hemochromatosis* / alpha-2-glycoprotein 1, zinc-binding* / MHC class I polypep...ENSDARG0000005171049
mhc1lla / si:dkey-52p2.5 / major histocompatibility complex class I LLA / MR1* / HFE* / MICB* / MICA* / Mill2* / FCGRT* / AZGP1* / Mill1* / P25311* / Q95460* / Q8HWB0* / H2-T10* / H2-T22* /...ENSDARG0000009697748
si:dkey-52p2.5 / MR1* / HFE* / MICA* / MICB* / Mill2* / Mill1* / AZGP1* / FCGRT* / P55899* / H2-T10* / H2-T22* / H2-T24* / P25311* / P70387* / Q29980* / Q30201* / Q61559* / Q64726* / Q8HWB0...ENSDARG0000009694047
mhc1laa / major histocompatibility complex class I LAA / HFE* / MR1* / MICB* / MICA* / FCGRT* / Mill1* / Mill2* / AZGP1* / P25311* / H2-T10* / H2-T22* / H2-T24* / P55899* / P70387* / Q29980...ENSDARG0000001605641
CR339041.3 / MR1* / HFE* / MICB* / MICA* / AZGP1* / FCGRT* / Mill1* / Mill2* / Q8HWB0* / Q30201* / Q29980* / P70387* / P55899* / P25311* / Q95460* / H2-T10* / H2-T22* / H2-T24* / Q64726* / ...ENSDARG0000011578140
mhc1lba / major histocompatibility complex class I LBA / MR1* / HFE* / MICA* / MICB* / FCGRT* / AZGP1* / P55899* / Q29980* / P25311* / Q95460* / Q30201* / hemochromatosis* / alpha-2-glycopr...ENSDARG0000001622739
mhc1lia / major histocompatibility complex class I LIA / HFE* / MR1* / MICB* / MICA* / FCGRT* / Mill1* / Mill2* / AZGP1* / P25311* / H2-T10* / H2-T22* / H2-T24* / P55899* / P70387* / Q29980...ENSDARG0000009776639
si:ch211-147g22.4 / MR1* / HFE* / MICA* / MICB* / Mill2* / Mill1* / AZGP1* / FCGRT* / P55899* / H2-T10* / H2-T22* / H2-T24* / P25311* / P70387* / Q29980* / Q30201* / Q61559* / Q64726* / Q8H...ENSDARG0000009727538
si:dkey-225f5.5 / MR1* / HFE* / MICA* / MICB* / Mill2* / Mill1* / AZGP1* / FCGRT* / P55899* / H2-T10* / H2-T22* / H2-T24* / P25311* / P70387* / Q29980* / Q30201* / Q61559* / Q64726* / Q8HWB...ENSDARG0000005581337
mhc1uba / major histocompatibility complex class I UBA / MR1* / HFE* / MICA* / MICB* / Mill1* / Mill2* / FCGRT* / AZGP1* / H2-T22* / H2-T24* / Q61559* / Q30201* / Q29980* / P70387* / P55899...ENSDARG0000007596323
mhc1uka / major histocompatibility complex class I UKA / MR1* / HFE* / MICA* / MICB* / Mill1* / Mill2* / FCGRT* / AZGP1* / H2-T22* / H2-T24* / Q61559* / Q30201* / Q29980* / P70387* / P55899...ENSDARG0000009273122
FO904903.1 / Danio rerio major histocompatibility complex class I ULA (mhc1ula), mRNA. / HFE* / MR1* / MICA* / MICB* / FCGRT* / AZGP1* / P25311* / Q95460* / Q30201* / Q29980* / P55899* / he...ENSDARG0000005903921
mhc1zja / major histocompatibility complex class I ZJAENSDARG0000007476518
mhc1zea / major histocompatibility complex class I ZEAENSDARG0000000147017
mhc1zba / major histocompatibility complex class I ZBAENSDARG0000003658817
mhc1uma / major histocompatibility complex class I UMA / MR1* / HFE* / MICA* / MICB* / FCGRT* / AZGP1* / Q30201* / Q95460* / P25311* / Q29980* / P55899* / hemochromatosis* / alpha-2-glycopr...ENSDARG0000003916417


Protein motifs (from Interpro)
Interpro ID Name
 IPR003597  Immunoglobulin C1-set
 IPR007110  Immunoglobulin-like domain
 IPR011161  MHC class I-like antigen recognition-like
 IPR011162  MHC classes I/II-like antigen recognition protein
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Transferrin endocytosis and recycling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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