ENSDARG00000023815


Danio rerio

Features
Gene ID: ENSDARG00000023815
  
Biological name :uvrag
  
Synonyms : UV radiation resistance associated gene / uvrag
  
Possible biological names infered from orthology : Q8K245 / Q9P2Y5 / UV radiation resistance associated
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 32264857
Gene end: 32494499
  
Corresponding Affymetrix probe sets: Dr.17188.1.S1_at (Zebrafish Array)   Dr.3717.1.S1_at (Zebrafish Array)   NM_201069_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000111856
Ensembl peptide - ENSDARP00000116083
Ensembl peptide - ENSDARP00000004804
NCBI entrez gene - 394044     See in Manteia.
RefSeq - NM_201069
RefSeq - XM_005172655
RefSeq Peptide - NP_957363
swissprot - F1R6C0
swissprot - E7EY87
swissprot - F1RBZ5
ZFIN ID - ZDB-GENE-040426-924
Ensembl - ENSDARG00000023815
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UVRAGENSGALG00000000845Gallus gallus
 UVRAGENSG00000198382Homo sapiens
 UvragENSMUSG00000035354Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR018791  UV radiation resistance protein/autophagy-related protein 14


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035493 SNARE complex assembly IBA
 biological_processGO:0060627 regulation of vesicle-mediated transport IBA
 cellular_componentGO:0000323 lytic vacuole IBA
 cellular_componentGO:0005768 endosome IBA
 molecular_functionGO:0000149 SNARE binding IBA


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000060469 pik3r4 / phosphoinositide-3-kinase, regulatory subunit 4 / Q8VD65* / Q99570*  / complex
 ENSDARG00000079128 becn1 / F1RCP1 / beclin 1, autophagy related / BECN2* / Q14457* / O88597* / P0DM65* / A8MW95* / Gm38100* / beclin 2* / beclin 1* / Beclin-1 Beclin-1-C 35 kDa Beclin-1-C 37 kDa*  / complex
 ENSDARG00000054829 pik3c3 / phosphatidylinositol 3-kinase, catalytic subunit type 3 / Q6PF93* / Q8NEB9*  / complex






 

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