ENSDARG00000025824


Danio rerio

Features
Gene ID: ENSDARG00000025824
  
Biological name :dmtf1
  
Synonyms : cyclin D binding myb-like transcription factor 1 / dmtf1 / Q6DG03
  
Possible biological names infered from orthology : 4932411N23Rik / Q8CE22 / Q9Y222 / RIKEN cDNA 4932411N23 gene
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 9652216
Gene end: 9667410
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000145142
Ensembl peptide - ENSDARP00000152372
Ensembl peptide - ENSDARP00000028305
Ensembl peptide - ENSDARP00000114863
Ensembl peptide - ENSDARP00000125445
NCBI entrez gene - 436938     See in Manteia.
RefSeq - NM_001002665
RefSeq Peptide - NP_001002665
swissprot - H0WF14
swissprot - H2L2P5
swissprot - B2GT69
swissprot - Q6DG03
ZFIN ID - ZDB-GENE-040718-413
Ensembl - ENSDARG00000025824
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DMTF1ENSGALG00000030844Gallus gallus
 DMTF1ENSG00000135164Homo sapiens
 4932411N23RikENSMUSG00000058670Mus musculus
 Dmtf1ENSMUSG00000042508Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ttf1 / transcription termination factor, RNA polymerase I / Q15361* / Q62187* / transcription termination factor 1*ENSDARG0000009196716
si:ch73-376l24.6 / TTF1* / Q62187* / Q15361* / transcription termination factor 1* / transcription termination factor, RNA polymerase I*ENSDARG0000009399915
si:ch73-376l24.2 / TTF1* / Q62187* / Q15361* / transcription termination factor 1* / transcription termination factor, RNA polymerase I*ENSDARG0000009250814
si:ch73-376l24.4 / TTF1* / Q62187* / Q15361* / transcription termination factor 1* / transcription termination factor, RNA polymerase I*ENSDARG0000009340314
si:ch73-37h15.2 / TTF1* / Q62187* / Q15361* / transcription termination factor 1* / transcription termination factor, RNA polymerase I*ENSDARG0000009410714
si:ch73-376l24.3 / TTF1* / Q62187* / Q15361* / transcription termination factor 1* / transcription termination factor, RNA polymerase I*ENSDARG0000009404313


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017877  Myb-like domain
 IPR017930  Myb domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0030154 cell differentiation IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr