ENSDARG00000031588


Danio rerio
domainsi:dkey-239b22.1membranevwfczonapellucidavonwillebrandfactortypedtrypsininhibitor-likecysteinerichnidouncharacterisedcysteine-richtilacell-matrixadhesionintegralcomponent

Features
Gene ID: ENSDARG00000031588
  
Biological name :si:dkey-239b22.1
  
Synonyms : si:dkey-239b22.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 38929663
Gene end: 38974869
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129201
Ensembl peptide - ENSDARP00000145112
NCBI entrez gene - 100330672     See in Manteia.
RefSeq - XM_017358564
RefSeq - XM_009306880
swissprot - X1WG46
ZFIN ID - ZDB-GENE-131119-12
Ensembl - ENSDARG00000031588
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-39f2.3ENSDARG0000009753933
zanl / zonadhesin, like / ZAN* / zonadhesin* / zonadhesin (gene/pseudogene)*ENSDARG0000005678110
tecta / tectorin alpha / O08523* / O75443*ENSDARG0000005955810
si:dkey-65b12.6 / FCGBP* / 9530053A07Rik* / RIKEN cDNA 9530053A07 gene* / Fc fragment of IgG binding protein*ENSDARG000000768309
scospondin / subcommissural organ spondin / SSPO* / Q8CG65* / SCO-spondin*ENSDARG000000678597
muc5.2 / mucin 5.2 / MUC5B* / MUC5AC* / P98088* / Q9HC84* / mucin 5B, oligomeric mucus/gel-forming* / mucin 5AC, oligomeric mucus/gel-forming*ENSDARG000000585566
otog / otogelin / Q6ZRI0*ENSDARG000000684606
muc5.1 / mucin 5.1, oligomeric mucus/gel-forming / MUC5B* / MUC5AC* / P98088* / Q9HC84* / mucin 5B, oligomeric mucus/gel-forming* / mucin 5AC, oligomeric mucus/gel-forming*ENSDARG000000703316
vwf / von Willebrand factor / P04275*ENSDARG000000772316
otogl / otogelin-like / F7A4A7* / Q3ZCN5* / Otogelin-like protein *ENSDARG000000887506
muc5.3 / mucin 5.3 / MUC5B* / MUC5AC* / P98088* / Q9HC84* / mucin 5B, oligomeric mucus/gel-forming* / mucin 5AC, oligomeric mucus/gel-forming*ENSDARG000000994706
CABZ01080550.1ENSDARG000001006215


Protein motifs (from Interpro)
Interpro ID Name
 IPR001007  VWFC domain
 IPR001507  Zona pellucida domain
 IPR001846  von Willebrand factor, type D domain
 IPR002919  Trypsin Inhibitor-like, cysteine rich domain
 IPR003886  NIDO domain
 IPR014853  Uncharacterised domain, cysteine-rich
 IPR025615  TILa domain


Gene Ontology (GO)
cell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesion
membranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0007160 cell-matrix adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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