ENSDARG00000035352


Danio rerio

Features
Gene ID: ENSDARG00000035352
  
Biological name :pafah1b2
  
Synonyms : pafah1b2 / platelet-activating factor acetylhydrolase 1b, catalytic subunit 2
  
Possible biological names infered from orthology : P68402 / Platelet-activating factor acetylhydrolase IB subunit beta / Q61206
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 37966505
Gene end: 37971008
  
Corresponding Affymetrix probe sets: Dr.15254.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111226
NCBI entrez gene - 567170     See in Manteia.
RefSeq - NM_001082851
RefSeq Peptide - NP_001076320
swissprot - A2BGB4
ZFIN ID - ZDB-GENE-060526-43
Ensembl - ENSDARG00000035352
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PAFAH1B2ENSGALG00000027918Gallus gallus
 P68402ENSG00000168092Homo sapiens
 Q61206ENSMUSG00000003131Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pafah1b3 / platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit / Q15102* / Q61205* / Platelet-activating factor acetylhydrolase IB subunit gamma * / platelet activating fa...ENSDARG0000005804755
pafah1b3 / platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit / Q15102* / Q61205* / Platelet-activating factor acetylhydrolase IB subunit gamma * / platelet activating fa...ENSDARG0000010533649


Protein motifs (from Interpro)
Interpro ID Name
 IPR013830  SGNH hydrolase-type esterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0047179 platelet-activating factor acetyltransferase activity IBA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
COPI-independent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000032013 Q7T394 / pafah1b1a / platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a / P43034* / P63005* / PAFAH1B1* / platelet-activating factor acetylhydrolase, isoform 1b, subunit 1...  / complex
 ENSDARG00000058047 pafah1b3 / platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit / Q15102* / Q61205* / Platelet-activating factor acetylhydrolase IB subunit gamma * / platelet activating fa...  / complex






 

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