ENSDARG00000058047


Danio rerio

Features
Gene ID: ENSDARG00000058047
  
Biological name :pafah1b3
  
Synonyms : pafah1b3 / platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit
  
Possible biological names infered from orthology : platelet activating factor acetylhydrolase 1b catalytic subunit 3 / Platelet-activating factor acetylhydrolase IB subunit gamma / Q15102 / Q61205
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 11773395
Gene end: 11779661
  
Corresponding Affymetrix probe sets: Dr.10814.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121036
Ensembl peptide - ENSDARP00000153820
Ensembl peptide - ENSDARP00000060144
Ensembl peptide - ENSDARP00000120580
NCBI entrez gene - 394033     See in Manteia.
RefSeq - NM_201058
RefSeq Peptide - NP_957352
swissprot - E9QCS6
swissprot - Q7ZTU4
ZFIN ID - ZDB-GENE-040426-1026
Ensembl - ENSDARG00000058047
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q15102ENSG00000079462Homo sapiens
 Q61205ENSMUSG00000005447Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pafah1b3 / platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit / Q15102* / Q61205* / Platelet-activating factor acetylhydrolase IB subunit gamma * / platelet activating fa...ENSDARG0000010533671
pafah1b2 / platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 / P68402* / Q61206* / Platelet-activating factor acetylhydrolase IB subunit beta *ENSDARG0000003535247


Protein motifs (from Interpro)
Interpro ID Name
 IPR013830  SGNH hydrolase-type esterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0047179 platelet-activating factor acetyltransferase activity IBA


Pathways (from Reactome)
Pathway description
COPI-independent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000032013 Q7T394 / pafah1b1a / platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a / P43034* / P63005* / PAFAH1B1* / platelet-activating factor acetylhydrolase, isoform 1b, subunit 1...  / complex
 ENSDARG00000035352 pafah1b2 / platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 / P68402* / Q61206* / Platelet-activating factor acetylhydrolase IB subunit beta *  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr