ENSDARG00000036499


Danio rerio

Features
Gene ID: ENSDARG00000036499
  
Biological name :zgc:162171
  
Synonyms : zgc:162171
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 23865336
Gene end: 23873173
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000092182
NCBI entrez gene - 565931     See in Manteia.
RefSeq - NM_001082848
RefSeq Peptide - NP_001076317
swissprot - A3KNK9
ZFIN ID - ZDB-GENE-070424-24
Ensembl - ENSDARG00000036499
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab38c / RAB38c, member of RAS oncogene familyENSDARG0000007471966
rab38b / RAB38b, member of RAS oncogene family / RAB38* / P57729* / RAB38, member RAS oncogene family*ENSDARG0000011288957
rab32a / RAB32a, member RAS oncogene family / RAB32* / Q9CZE3* / Q13637* / RAB32, member RAS oncogene family*ENSDARG0000002903656
rab32b / RAB32b, member RAS oncogene familyENSDARG0000004116541
rab9b / RAB9B, member RAS oncogene family / Q8BHH2* / Q9NP90*ENSDARG0000010339129
rab23 / RAB23, member RAS oncogene family / Q9ULC3*ENSDARG0000000415128
rab7 / RAB7, member RAS oncogene family / RAB7A* / P51150* / P51149* / RAB7A, member RAS oncogene family*ENSDARG0000002049728
si:dkey-13a21.4ENSDARG0000002609828
rab9a / RAB9A, member RAS oncogene family / Rab9* / Q9R0M6* / P51151* / RAB9, member RAS oncogene family*ENSDARG0000004502728
zgc:100918ENSDARG0000008724328
zgc:91909ENSDARG0000002128727


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030697  Ras-related protein Rab29/Rab38/Rab32


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0032438 melanosome organization IBA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IBA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0042470 melanosome IBA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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