ENSDARG00000037954


Danio rerio

Features
Gene ID: ENSDARG00000037954
  
Biological name :tnnt1
  
Synonyms : tnnt1 / troponin T type 1 (skeletal, slow)
  
Possible biological names infered from orthology : O88346 / P13805 / troponin T1, skeletal, slow / troponin T1, slow skeletal type
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 32157140
Gene end: 32170878
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129404
Ensembl peptide - ENSDARP00000144169
Ensembl peptide - ENSDARP00000055306
NCBI entrez gene - 558627     See in Manteia.
RefSeq - NM_001128695
RefSeq Peptide - NP_001122167
swissprot - B3DG30
swissprot - X1WGP6
ZFIN ID - ZDB-GENE-080723-27
Ensembl - ENSDARG00000037954
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TNNT1ENSG00000105048Homo sapiens
 Tnnt1ENSMUSG00000064179Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tnnt2a / troponin T type 2a (cardiac)ENSDARG0000002061043
tnnt3b / troponin T type 3b (skeletal, fast) / TNNT3* / P45378* / troponin T3, skeletal, fast* / troponin T3, fast skeletal type*ENSDARG0000006845739
tnnt2e / troponin T2e, cardiacENSDARG0000004582238
tnnt2c / troponin T2c, cardiacENSDARG0000003224237
tnnt2d / troponin T2d, cardiacENSDARG0000000298836
tnnt2b / troponin T type 2b (cardiac)ENSDARG0000010069436
tnnt3a / troponin T type 3a (skeletal, fast) / TNNT3* / P45378* / troponin T3, skeletal, fast* / troponin T3, fast skeletal type*ENSDARG0000003027035


Protein motifs (from Interpro)
Interpro ID Name
 IPR001978  Troponin
 IPR027707  Troponin T


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006937 regulation of muscle contraction IEA
 cellular_componentGO:0005861 troponin complex IEA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000037539 tnnc1b / troponin C type 1b (slow) / TNNC1* / P63316* / P19123* / troponin C1, slow skeletal and cardiac type* / Troponin C, slow skeletal and cardiac muscles *  / complex
 ENSDARG00000052708 tnni1b / troponin I type 1b (skeletal, slow) / TNNI1* / P19237* / troponin I1, slow skeletal type*  / complex
 ENSDARG00000070835 tnnc2 / troponin C type 2 (fast) / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*  / complex
 ENSDARG00000095002 si:rp71-17i16.4 / TNNC2* / P20801* / P02585* / Troponin C, skeletal muscle * / troponin C2, fast skeletal type*  / complex






 

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