ENSDARG00000040547


Danio rerio

Features
Gene ID: ENSDARG00000040547
  
Biological name :b3gat1a
  
Synonyms : b3gat1a / beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) a
  
Possible biological names infered from orthology : B3GAT1 / beta-1,3-glucuronyltransferase 1 / Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 / Q9CW73 / Q9P2W7
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 36105930
Gene end: 36135799
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000059343
NCBI entrez gene - 548607     See in Manteia.
swissprot - Q5CB02
ZFIN ID - ZDB-GENE-050419-21
Ensembl - ENSDARG00000040547
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 B3GAT1ENSGALG00000001611Gallus gallus
 B3GAT1ENSG00000109956Homo sapiens
 B3gat1ENSMUSG00000045994Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CU633908.1ENSDARG0000011392870
b3gat2 / beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) / P59270* / Q9NPZ5* / beta-1,3-glucuronyltransferase 2* / Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 *ENSDARG0000003073347
b3gat3 / beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) / O94766* / P58158* / beta-1,3-glucuronyltransferase 3* / Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 *ENSDARG0000000193943


Protein motifs (from Interpro)
Interpro ID Name
 IPR005027  Glycosyl transferase, family 43
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IBA
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0030204 chondroitin sulfate metabolic process IBA
 biological_processGO:0050650 chondroitin sulfate proteoglycan biosynthetic process IBA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IBA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000040547 b3gat1a / beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) a / Q9P2W7* / Q9CW73* / B3GAT1* / beta-1,3-glucuronyltransferase 1* / Galactosylgalactosylxylosylprotein 3-beta-glucur...  / complex






 

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