ENSDARG00000041921


Danio rerio

Features
Gene ID: ENSDARG00000041921
  
Biological name :hsbp1b
  
Synonyms : heat shock factor binding protein 1b / hsbp1b
  
Possible biological names infered from orthology : heat shock factor binding protein 1 / HSBP1 / O75506 / Q9CQZ1
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 14334123
Gene end: 14337458
  
Corresponding Affymetrix probe sets: Dr.11058.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000061434
Ensembl peptide - ENSDARP00000112904
NCBI entrez gene - 393727     See in Manteia.
swissprot - F1RCS5
swissprot - Q6PBV8
ZFIN ID - ZDB-GENE-040426-1721
Ensembl - ENSDARG00000041921
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HSBP1ENSGALG00000043039Gallus gallus
 HSBP1ENSG00000230989Homo sapiens
 Hsbp1ENSMUSG00000031839Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hsbp1a / heat shock factor binding protein 1aENSDARG0000006942580
hsbp1l1 / heat shock factor binding protein 1 like 1ENSDARG0000007598453


Protein motifs (from Interpro)
Interpro ID Name
 IPR009643  Heat shock factor binding 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007417 central nervous system development IMP
 biological_processGO:0014029 neural crest formation IMP
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA


Pathways (from Reactome)
Pathway description
Attenuation phase
HSF1-dependent transactivation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000012 central nervous system central nervous system apoptotic , abnormal
central nervous system physical object quality , abnormal
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 ZFA:0000084 yolk yolk increased size , abnormal
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 ZFA:0000114 heart heart deformed , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism anterior-posterior axis increased curvature , abnormal
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 ZFA:0001114 head head deformed , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000008818 hsf1 / heat shock transcription factor 1 / P38532* / Q00613* / heat shock factor 1*  / complex / reaction
 ENSDARG00000041921 hsbp1b / heat shock factor binding protein 1b / HSBP1* / O75506* / Q9CQZ1* / heat shock factor binding protein 1*  / complex






 

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contact: otassy@igbmc.fr