ENSDARG00000042796
Danio rerio | |
Features
| Gene ID: | ENSDARG00000042796 | | | | | Biological name : | yy1a | | | | | Synonyms : | yy1a / YY1 transcription factor a | | | | | Possible biological names infered from orthology : | P25490 / Q00899 / Q96MM3 / YY1 / YY1 transcription factor / ZFP42 / ZFP42 zinc finger protein / zinc finger protein 42 | | | | | Species: | Danio rerio | | | | | Chr. number: | 17 | | Strand: | -1 | | Band: | | | Gene start: | 30857008 | | Gene end: | 30863252 | | | | | Corresponding Affymetrix probe sets: | Dr.812.1.A1_at (Zebrafish Array) NM_212617_at (Zebrafish Genome Array with custom cdf files) | | | | | Cross references: | Ensembl peptide - ENSDARP00000062810
NCBI entrez gene - 322397
See in Manteia.
RefSeq - NM_212617
RefSeq Peptide - NP_997782
swissprot - Q7T1S3
ZFIN ID - ZDB-GENE-030131-1117
Ensembl - ENSDARG00000042796
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| yy1b / YY1 transcription factor b / YY1* / ZFP42* / Q96MM3* / P25490* / Q00899* / zinc finger protein 42* / YY1 transcription factor* / ZFP42 zinc finger protein* | ENSDARG00000027978 | 82 | | znf143a / zinc finger protein 143a / P52747* / Zfp143* / ZNF143* / O70230* / zinc finger protein 143* | ENSDARG00000012887 | 20 | | Q1LYE3 / znf143b / zinc finger protein 143b / P52747* / Zfp143* / ZNF143* / O70230* / zinc finger protein 143* | ENSDARG00000041581 | 19 | | znf76 / zinc finger protein 76 / Zfp523* / P36508* / Q8BMU0* / zinc finger protein 523* | ENSDARG00000013279 | 17 | | ZXDC / si:dkey-156n14.3 / Q2QGD7* / ZXD family zinc finger C* | ENSDARG00000052351 | 17 | | mtf1 / metal-regulatory transcription factor 1 / Q14872* | ENSDARG00000102898 | 17 | | gtf3aa / general transcription factor IIIAa / GTF3A* / Q92664* / transcription factor IIIA * / general transcription factor IIIA* | ENSDARG00000030267 | 16 | | znf410 / zinc finger protein 410 / Q86VK4* / Q8BKX7* / Zfp410* | ENSDARG00000008218 | 13 | | gtf3ab / general transcription factor IIIA, b / GTF3A* / Q92664* / transcription factor IIIA * / general transcription factor IIIA* | ENSDARG00000071583 | 13 | | si:dkey-208k4.2 | ENSDARG00000104170 | 12 |
Protein motifs (from Interpro)
Gene Ontology (GO)
Pathways (from Reactome)
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000008 | brain | brain morphology , abnormal
brain decreased distribution , abnormal
brain decreased size , abnormal |
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| | ZFA:0000029 | hindbrain | hindbrain decreased size , abnormal |
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| | ZFA:0000107 | eye | eye decreased distribution , abnormal |
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| | ZFA:0000109 | forebrain | forebrain decreased size , abnormal |
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| | ZFA:0000114 | heart | heart morphology , abnormal
heart spatial pattern , abnormal
heart increased length , abnormal
heart hypoplastic , abnormal
heart tubular , abnormal |
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| | ZFA:0000128 | midbrain | midbrain decreased size , abnormal |
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| | ZFA:0000155 | somite | somite decreased distribution , abnormal
somite apoptotic , abnormal |
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| | ZFA:0000471 | atrium | atrium absent , abnormal
atrium aplastic , abnormal |
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| | ZFA:0001094 | whole organism | whole organism spatial pattern , abnormal
whole organism decreased distribution , abnormal
whole organism increased amount , abnormal
whole organism apoptotic , abnormal
whole organism apoptotic process increased occurrence , abnormal
whole organism anterior-posterior axis decreased length , abnormal |
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| | ZFA:0001115 | trunk | trunk intersegmental vessel branchiness , abnormal
trunk intersegmental vessel increased branchiness , abnormal |
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| | ZFA:0001285 | intersegmental vessel | intersegmental vessel immature , abnormal |
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Interacting proteins (from Reactome)
| ENSDARG00000015990 | hcfc1a / host cell factor C1a / HCFC1* / Q61191* / P51610* / host cell factor C1* / Host cell factor 1 HCF N-terminal chain 1 HCF N-terminal chain 2 HCF N-terminal chain 3 HCF N-terminal ch... | / complex | | ENSDARG00000011609 | si:ch211-262e15.1 / FOXK2* / Q01167* / Q3UCQ1* / forkhead box K2* / Forkhead box protein K2 * | / complex | | ENSDARG00000036956 | asxl1 / additional sex combs like transcriptional regulator 1 / P59598* / Q8IXJ9* / Putative Polycomb group protein ASXL1 * / additional sex combs like 1, transcriptional regulator* | / complex | | ENSDARG00000015427 | hdac1 / histone deacetylase 1 / O09106* / Q13547* / Gm10093* | / complex | | ENSDARG00000030583 | foxk2 / forkhead box K2 / Q01167* | / complex | | ENSDARG00000037872 | foxk1 / forkhead box K1 / P42128* / P85037* / Forkhead box protein K1 * | / complex | | ENSDARG00000063051 | bap1 / BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) / Q92560* / Q99PU7* / BRCA1 associated protein 1* / Ubiquitin carboxyl-terminal hydrolase BAP1 * | / complex / reaction | | ENSDARG00000068436 | Q6PI20 / h3f3b.1 / H3 histone, family 3B.1 / H3F3B* / H3F3C* / P84243* / Q6NXT2* / H3 histone family member 3C* / H3 histone family member 3B* | / complex | | ENSDARG00000076501 | asxl2 / additional sex combs like transcriptional regulator 2 / Q76L83* / putative Polycomb group protein ASXL2 isoform 1 * / additional sex combs like 2, transcriptional regulator* | / complex | | ENSDARG00000012519 | hcfc1b / host cell factor C1b / HCFC1* / Q61191* / P51610* / host cell factor C1* / Host cell factor 1 HCF N-terminal chain 1 HCF N-terminal chain 2 HCF N-terminal chain 3 HCF N-terminal ch... | / complex | | ENSDARG00000105345 | zgc:173552 | / complex | | ENSDARG00000105359 | Q4QRF4 / FP325123.1 / Histone H3.2 | / complex |
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