ENSDARG00000030267


Danio rerio

Features
Gene ID: ENSDARG00000030267
  
Biological name :gtf3aa
  
Synonyms : general transcription factor IIIAa / gtf3aa
  
Possible biological names infered from orthology : general transcription factor IIIA / GTF3A / Q92664 / transcription factor IIIA
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 67980187
Gene end: 67993086
  
Corresponding Affymetrix probe sets: Dr.14750.1.S1_at (Zebrafish Array)   Dr.14750.2.A1_at (Zebrafish Array)   NM_001003866_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000049330
Ensembl peptide - ENSDARP00000124885
NCBI entrez gene - 445389     See in Manteia.
RefSeq - NM_001003866
RefSeq Peptide - NP_001003866
swissprot - F8W632
swissprot - A2BEV2
ZFIN ID - ZDB-GENE-041006-1
Ensembl - ENSDARG00000030267
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTF3AENSGALG00000017098Gallus gallus
 GTF3AENSG00000122034Homo sapiens
 Gtf3aENSMUSG00000016503Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gtf3ab / general transcription factor IIIA, b / GTF3A* / Q92664* / transcription factor IIIA * / general transcription factor IIIA*ENSDARG0000007158336
si:dkey-208k4.2ENSDARG0000010417030
ZXDC / si:dkey-156n14.3 / Q2QGD7* / ZXD family zinc finger C*ENSDARG0000005235126
znf143a / zinc finger protein 143a / P52747* / Zfp143* / ZNF143* / O70230* / zinc finger protein 143*ENSDARG0000001288721
Q1LYE3 / znf143b / zinc finger protein 143b / P52747* / Zfp143* / ZNF143* / O70230* / zinc finger protein 143*ENSDARG0000004158121
znf76 / zinc finger protein 76 / Zfp523* / P36508* / Q8BMU0* / zinc finger protein 523*ENSDARG0000001327920
mtf1 / metal-regulatory transcription factor 1 / Q14872*ENSDARG0000010289820
yy1a / YY1 transcription factor a / YY1* / ZFP42* / Q96MM3* / P25490* / Q00899* / zinc finger protein 42* / YY1 transcription factor* / ZFP42 zinc finger protein*ENSDARG0000004279616
yy1b / YY1 transcription factor b / YY1* / ZFP42* / Q96MM3* / P25490* / Q00899* / zinc finger protein 42* / YY1 transcription factor* / ZFP42 zinc finger protein*ENSDARG0000002797815
znf410 / zinc finger protein 410 / Q86VK4* / Q8BKX7* / Zfp410*ENSDARG0000000821814


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000112 gut gut quality , abnormal
gut hypoplastic , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000014994 tbp / Q7SXL3 / TATA box binding protein / P20226* / P29037*  / complex / reaction
 ENSDARG00000017835 brf1a / BRF1, RNA polymerase III transcription initiation factor a / BRF1* / Q92994* / BRF1, RNA polymerase III transcription initiation factor subunit* / BRF1, RNA polymerase III transcrip...  / complex / reaction






 

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