ENSDARG00000044490


Danio rerio

Features
Gene ID: ENSDARG00000044490
  
Biological name :tlr9
  
Synonyms : tlr9 / toll-like receptor 9
  
Possible biological names infered from orthology : AC097637.1 / Q9EQU3 / Q9NR96
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 53730368
Gene end: 53735399
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105677
Ensembl peptide - ENSDARP00000150201
NCBI entrez gene - 403128     See in Manteia.
RefSeq - NM_001130594
RefSeq Peptide - NP_001124066
swissprot - F1QY61
ZFIN ID - ZDB-GENE-040219-10
Ensembl - ENSDARG00000044490
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AC097637.1ENSG00000173366Homo sapiens
 TLR9ENSG00000239732Homo sapiens
 Tlr9ENSMUSG00000045322Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tlr7 / toll-like receptor 7 / Q9NYK1*ENSDARG0000006881233
TLR8 / toll like receptor 8 / Q9NR97*ENSDARG0000010483231
tlr8b / toll-like receptor 8b / TLR8* / Q9NR97* / P58682* / toll like receptor 8*ENSDARG0000007367524
tlr21 / toll-like receptor 21ENSDARG0000005804520
tlr3 / toll-like receptor 3 / O15455* / Q99MB1* / Mus musculus toll-like receptor 3 (Tlr3), transcript variant 3, mRNA.*ENSDARG0000001606518
tlr22 / toll-like receptor 22ENSDARG0000010404518
tlr5a / toll-like receptor 5a / TLR5* / O60602* / toll like receptor 5*ENSDARG0000004441517
tlr5b / toll-like receptor 5b / TLR5* / O60602* / toll like receptor 5*ENSDARG0000005232217
tlr2 / toll-like receptor 2 / O60603*ENSDARG0000003775816
tlr4al / toll-like receptor 4a, like / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000007567116
tlr1 / toll-like receptor 1 / TLR6* / TLR10* / Q15399* / Q9BXR5* / Q9EPQ1* / Q9Y2C9* / toll like receptor 6* / toll like receptor 10*ENSDARG0000010064916
tlr4ba / toll-like receptor 4b, duplicate a / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000001974215
tlr4bb / toll-like receptor 4b, duplicate b / TLR4* / Q9QUK6* / O00206* / toll like receptor 4*ENSDARG0000002204815
tlr18 / toll-like receptor 18ENSDARG0000004024915
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000007039214
tlr20.2 / tlr20.4 / toll-like receptor 20, tandem duplicate 2 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000008870114
tlr19 / toll-like receptor 19 / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000002666313
cd180 / CD180 molecule / Q62192* / Q99467* / CD180 antigen *ENSDARG0000009375013
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000010952210
senp7a / SUMO1/sentrin specific peptidase 7a / Tlr13* / Q6R5N8* / Toll-like receptor 13 *ENSDARG0000011513610


Protein motifs (from Interpro)
Interpro ID Name
 IPR000157  Toll/interleukin-1 receptor homology (TIR) domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR026906  Leucine rich repeat 5
 IPR027175  Toll-like receptor 8
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002224 toll-like receptor signaling pathway IDA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006954 inflammatory response IBA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0019731 antibacterial humoral response IDA
 biological_processGO:0045087 innate immune response IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
PI3K Cascade
Trafficking and processing of endosomal TLR
Toll Like Receptor 9 (TLR9) Cascade
TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
MyD88 dependent cascade initiated on endosome


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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