ENSDARG00000044895


Danio rerio
repeatfmodadomainkeratansulfaten-terminaltypicalsubtypesuperfamilyextracellularspacebiosynthesisdegradation

Features
Gene ID: ENSDARG00000044895
  
Biological name :fmoda
  
Synonyms : fibromodulin a / fmoda
  
Possible biological names infered from orthology : fibromodulin / FMOD / P50608 / Q06828
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 21025895
Gene end: 21031773
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000065984
Ensembl peptide - ENSDARP00000155591
NCBI entrez gene - 791822     See in Manteia.
RefSeq - NM_001030072
RefSeq Peptide - NP_001025243
swissprot - F1QG51
ZFIN ID - ZDB-GENE-041008-23
Ensembl - ENSDARG00000044895
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FMODENSGALG00000034067Gallus gallus
 FMODENSG00000122176Homo sapiens
 FmodENSMUSG00000041559Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fmodb / fibromodulin b / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000001029455
lum / lumican / P51884* / P51885*ENSDARG0000004558043
zgc:113307ENSDARG0000004489438
prelp / proline/arginine-rich end leucine-rich repeat protein / Q9JK53* / P51888* / proline arginine-rich end leucine-rich repeat* / proline and arginine rich end leucine rich repeat protein*ENSDARG0000007059738
kera / Q5RI43 / keratocan / O35367* / O60938*ENSDARG0000005693837
omd / osteomodulin / O35103* / Q99983*ENSDARG0000009360033
bgnb / biglycan b / BGN* / P21810* / P28653* / biglycan*ENSDARG0000000294529
bgna / biglycan a / BGN* / P21810* / P28653* / biglycan*ENSDARG0000001788429
ecm2 / extracellular matrix protein 2, female organ and adipocyte specific / O94769* / Q5FW85* / extracellular matrix protein 2*ENSDARG0000007154929
dcn / decorin / P07585* / P28654*ENSDARG0000001206628
wu:fc23c09ENSDARG0000008800228
aspn / asporin (LRR class 1) / Q99MQ4* / Q9BXN1* / asporin*ENSDARG0000000219227
podn / podocan / Q7TQ62* / Q7Z5L7*ENSDARG0000001902526
si:dkey-6n6.1ENSDARG0000006248726
si:dkey-32e6.6ENSDARG0000007085725


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
extracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular region
TypeGO IDTermEv.Code
 cellular_componentGO:0005615 extracellular space IBA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
Keratan sulfate degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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