ENSDARG00000062487


Danio rerio
repeattypicalsubtypedomainsuperfamilyextracellularspace

Features
Gene ID: ENSDARG00000062487
  
Biological name :si:dkey-6n6.1
  
Synonyms : si:dkey-6n6.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 14130245
Gene end: 14151051
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000084860
Ensembl peptide - ENSDARP00000119295
NCBI entrez gene - 100170811     See in Manteia.
RefSeq - NM_001130646
RefSeq Peptide - NP_001124118
swissprot - F1R6B0
swissprot - Q1LYN3
ZFIN ID - ZDB-GENE-060503-80
Ensembl - ENSDARG00000062487
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ecm2 / extracellular matrix protein 2, female organ and adipocyte specific / O94769* / Q5FW85* / extracellular matrix protein 2*ENSDARG0000007154935
si:dkey-32e6.6ENSDARG0000007085728
wu:fc23c09ENSDARG0000008800220
podn / podocan / Q7TQ62* / Q7Z5L7*ENSDARG0000001902518
bgna / biglycan a / BGN* / P21810* / P28653* / biglycan*ENSDARG0000001788415
zgc:113307ENSDARG0000004489415
aspn / asporin (LRR class 1) / Q99MQ4* / Q9BXN1* / asporin*ENSDARG0000000219214
bgnb / biglycan b / BGN* / P21810* / P28653* / biglycan*ENSDARG0000000294514
fmodb / fibromodulin b / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000001029414
dcn / decorin / P07585* / P28654*ENSDARG0000001206614
lum / lumican / P51884* / P51885*ENSDARG0000004558014
omd / osteomodulin / O35103* / Q99983*ENSDARG0000009360014
fmoda / fibromodulin a / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000004489513
kera / Q5RI43 / keratocan / O35367* / O60938*ENSDARG0000005693813
prelp / proline/arginine-rich end leucine-rich repeat protein / Q9JK53* / P51888* / proline arginine-rich end leucine-rich repeat* / proline and arginine rich end leucine rich repeat protein*ENSDARG0000007059713


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
extracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular region
TypeGO IDTermEv.Code
 cellular_componentGO:0005615 extracellular space IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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