ENSDARG00000088002


Danio rerio

Features
Gene ID: ENSDARG00000088002
  
Biological name :wu:fc23c09
  
Synonyms : wu:fc23c09
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 16447485
Gene end: 16451375
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000104802
Ensembl peptide - ENSDARP00000150848
NCBI entrez gene - 101882092     See in Manteia.
swissprot - E7EXM1
ZFIN ID - ZDB-GENE-030131-2988
Ensembl - ENSDARG00000088002
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ecm2 / extracellular matrix protein 2, female organ and adipocyte specific / O94769* / Q5FW85* / extracellular matrix protein 2*ENSDARG0000007154921
si:dkey-6n6.1ENSDARG0000006248720
podn / podocan / Q7TQ62* / Q7Z5L7*ENSDARG0000001902519
si:dkey-32e6.6ENSDARG0000007085718
dcn / decorin / P07585* / P28654*ENSDARG0000001206615
kera / Q5RI43 / keratocan / O35367* / O60938*ENSDARG0000005693815
fmodb / fibromodulin b / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000001029414
bgna / biglycan a / BGN* / P21810* / P28653* / biglycan*ENSDARG0000001788414
fmoda / fibromodulin a / FMOD* / P50608* / Q06828* / fibromodulin*ENSDARG0000004489514
prelp / proline/arginine-rich end leucine-rich repeat protein / Q9JK53* / P51888* / proline arginine-rich end leucine-rich repeat* / proline and arginine rich end leucine rich repeat protein*ENSDARG0000007059714
aspn / asporin (LRR class 1) / Q99MQ4* / Q9BXN1* / asporin*ENSDARG0000000219213
bgnb / biglycan b / BGN* / P21810* / P28653* / biglycan*ENSDARG0000000294513
zgc:113307ENSDARG0000004489413
lum / lumican / P51884* / P51885*ENSDARG0000004558013
omd / osteomodulin / O35103* / Q99983*ENSDARG0000009360012


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005615 extracellular space IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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