ENSDARG00000052122
Danio rerio | |
Features
| Gene ID: | ENSDARG00000052122 | | | | | Biological name : | rag1 | | | | | Synonyms : | rag1 / recombination activating gene 1 | | | | | Possible biological names infered from orthology : | P15918 / P15919 / recombination activating 1 / V(D)J recombination-activating protein 1 Endonuclease RAG1 E3 ubiquitin-protein ligase RAG1 | | | | | Species: | Danio rerio | | | | | Chr. number: | 25 | | Strand: | 1 | | Band: | | | Gene start: | 9003230 | | Gene end: | 9009902 | | | | | Corresponding Affymetrix probe sets: | Dr.5748.1.S1_at (Zebrafish Array) NM_131389_at (Zebrafish Genome Array with custom cdf files) | | | | | Cross references: | Ensembl peptide - ENSDARP00000120100
Ensembl peptide - ENSDARP00000145989
Ensembl peptide - ENSDARP00000149705
Ensembl peptide - ENSDARP00000150596
NCBI entrez gene - 30663
See in Manteia.
RefSeq - XM_005162976
RefSeq - NM_131389
RefSeq - XM_009297786
RefSeq Peptide - NP_571464
swissprot - F1QD74
ZFIN ID - ZDB-GENE-990415-234
Ensembl - ENSDARG00000052122
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
No match
Protein motifs (from Interpro)
Gene Ontology (GO)
Pathways (from Reactome)
No match
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000037 | anatomical structure | anatomical structure decreased amount , abnormal
anatomical structure amount , ameliorated
anatomical structure increased amount , abnormal |
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| | ZFA:0000108 | fin | fin morphology , abnormal |
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| | ZFA:0000112 | gut | gut increased amount , abnormal |
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| | ZFA:0000123 | liver | liver increased amount , abnormal |
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| | ZFA:0000368 | integument | integument increased amount , abnormal
integument leukocyte increased amount , abnormal |
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| | ZFA:0000529 | kidney | kidney increased amount , abnormal
kidney decreased amount , abnormal |
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| | ZFA:0000669 | head kidney | head kidney T cell absent , abnormal
head kidney B cell absent , abnormal
head kidney increased amount , abnormal |
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| | ZFA:0001094 | whole organism | whole organism viability , abnormal
whole organism decreased size , abnormal
whole organism decreased life span , abnormal
whole organism decreased life span , ameliorated |
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| | ZFA:0005145 | muscle | muscle leukocyte increased amount , abnormal |
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| | ZFA:0009048 | granulocyte | granulocyte increased amount , abnormal |
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| | ZFA:0009250 | lymphocyte | lymphocyte decreased amount , abnormal
lymphocyte absent , abnormal |
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Interacting proteins (from Reactome)
No match
0 s.
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