ENSDARG00000052954


Danio rerio

Features
Gene ID: ENSDARG00000052954
  
Biological name :rab25b
  
Synonyms : rab25b / RAB25, member RAS oncogene family b
  
Possible biological names infered from orthology : P57735 / Q9WTL2 / RAB25 / RAB25, member RAS oncogene family
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 46695777
Gene end: 46714052
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135212
NCBI entrez gene - 574424     See in Manteia.
RefSeq - NM_001029971
RefSeq Peptide - NP_001025142
swissprot - F1Q9W8
ZFIN ID - ZDB-GENE-050706-113
Ensembl - ENSDARG00000052954
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000029812Gallus gallus
 RAB25ENSG00000132698Homo sapiens
 Rab25ENSMUSG00000008601Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab25a / RAB25, member RAS oncogene family a / RAB25* / Q9WTL2* / P57735* / RAB25, member RAS oncogene family*ENSDARG0000005880083
rab11bb / RAB11B, member RAS oncogene family, b / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*ENSDARG0000009008665
rab11a / RAB11a, member RAS oncogene familyENSDARG0000004145064
rab11ba / RAB11B, member RAS oncogene family, a / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*ENSDARG0000004187864
rab11al / RAB11a, member RAS oncogene family, likeENSDARG0000001434062
rab4b / RAB4B, member RAS oncogene family / Q91ZR1* / P61018* / RAB4B-EGLN2* / RAB4B-EGLN2 readthrough (NMD candidate)*ENSDARG0000001217744
rab14l / RAB14, member RAS oncogene family, likeENSDARG0000003518843
rab14 / RAB14, member RAS oncogene family / P61106* / Q91V41*ENSDARG0000007424642
rab4a / Q6PHI9 / RAB4a, member RAS oncogene family / P56371* / P20338* / Ras-related protein Rab-4A *ENSDARG0000001914441
rab2a / RAB2A, member RAS oncogene family / P53994* / P61019* / Ras-related protein Rab-2A *ENSDARG0000002026140
Q6DHC1 / rab18b / RAB18B, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*ENSDARG0000009834439
rab39ba / RAB39B, member RAS oncogene family a / RAB39B* / Q8BHC1* / Q96DA2* / RAB39B, member RAS oncogene family*ENSDARG0000001931238
rab39bb / RAB39B, member RAS oncogene family b / RAB39B* / Q8BHC1* / Q96DA2* / RAB39B, member RAS oncogene family*ENSDARG0000003650138
rab18a / RAB18A, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*ENSDARG0000005529138
rab42a / RAB42, member RAS oncogene family aENSDARG0000003421536
CU571310.1 / RAB42* / Q8N4Z0* / RAB42, member RAS oncogene family*ENSDARG0000010258031
rab42b / RAB42, member RAS oncogene familyENSDARG0000010117030
si:dkey-34d22.2ENSDARG0000010037928
si:dkey-34d22.5ENSDARG0000010486527
si:ch211-247i17.1ENSDARG0000007672717


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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