ENSDARG00000053858


Danio rerio

Features
Gene ID: ENSDARG00000053858
  
Biological name :crip1
  
Synonyms : crip1 / cysteine-rich protein 1
  
Possible biological names infered from orthology : AL928654.3 / P50238 / P63254
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 37385811
Gene end: 37395496
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000070454
Ensembl peptide - ENSDARP00000112846
NCBI entrez gene - 541319     See in Manteia.
swissprot - Q5BKV7
ZFIN ID - ZDB-GENE-041111-1
Ensembl - ENSDARG00000053858
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRIP1ENSGALG00000002771Gallus gallus
 AL928654.3ENSG00000257341Homo sapiens
 CRIP1ENSG00000213145Homo sapiens
 Crip1ENSMUSG00000006360Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
crip2 / cysteine-rich protein 2 / P52943* / Q9DCT8*ENSDARG0000007067069
zgc:101840 / CRIP2* / P52943* / Q9DCT8* / cysteine rich protein 2*ENSDARG0000003320168
crip3 / cysteine-rich protein 3ENSDARG0000004339558
zgc:195282 / CRIP3* / Q6Q6R3* / Q6Q6R5* / cysteine rich protein 3*ENSDARG0000007948847
csrp1a / cysteine and glycine-rich protein 1a / CSRP1* / P21291* / P97315* / cysteine and glycine rich protein 1*ENSDARG0000000660344
csrp1b / cysteine and glycine-rich protein 1b / CSRP1* / P21291* / cysteine and glycine rich protein 1*ENSDARG0000003098043
csrp2 / cysteine and glycine-rich protein 2 / P97314* / Q16527*ENSDARG0000001196140
csrp3 / cysteine and glycine-rich protein 3 (cardiac LIM protein) / P50461* / P50462* / cysteine and glycine rich protein 3*ENSDARG0000010170639


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007507 heart development IMP
 biological_processGO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage ISS
 biological_processGO:0010043 response to zinc ion ISS
 biological_processGO:0060047 heart contraction IMP
 biological_processGO:0071236 cellular response to antibiotic ISS
 biological_processGO:0071493 cellular response to UV-B ISS
 cellular_componentGO:0005737 cytoplasm ISS
 molecular_functionGO:0003680 AT DNA binding ISS
 molecular_functionGO:0008270 zinc ion binding ISS
 molecular_functionGO:0008301 DNA binding, bending ISS
 molecular_functionGO:0042277 peptide binding ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000009 cardiac ventricle cardiac ventricle decreased functionality , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0001094 whole organism whole organism dead , abnormal
whole organism decreased life span , abnormal
Show

 ZFA:0001115 trunk trunk curved dorsal , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr