ENSDARG00000101706


Danio rerio

Features
Gene ID: ENSDARG00000101706
  
Biological name :csrp3
  
Synonyms : csrp3 / cysteine and glycine-rich protein 3 (cardiac LIM protein)
  
Possible biological names infered from orthology : cysteine and glycine rich protein 3 / P50461 / P50462
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 16548219
Gene end: 16562202
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000138514
Ensembl peptide - ENSDARP00000139671
Ensembl peptide - ENSDARP00000142983
NCBI entrez gene - 450005     See in Manteia.
RefSeq - NM_001006026
RefSeq - NM_001320091
RefSeq Peptide - NP_001006026
RefSeq Peptide - NP_001307020
swissprot - F1QJC0
ZFIN ID - ZDB-GENE-041010-119
Ensembl - ENSDARG00000101706
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSRP3ENSGALG00000004044Gallus gallus
 CSRP3ENSG00000129170Homo sapiens
 Csrp3ENSMUSG00000030470Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
csrp2 / cysteine and glycine-rich protein 2 / P97314* / Q16527*ENSDARG0000001196168
csrp1a / cysteine and glycine-rich protein 1a / CSRP1* / P21291* / P97315* / cysteine and glycine rich protein 1*ENSDARG0000000660366
csrp1b / cysteine and glycine-rich protein 1b / CSRP1* / P21291* / cysteine and glycine rich protein 1*ENSDARG0000003098064
zgc:101840 / CRIP2* / P52943* / Q9DCT8* / cysteine rich protein 2*ENSDARG0000003320137
crip2 / cysteine-rich protein 2 / P52943* / Q9DCT8*ENSDARG0000007067037
crip3 / cysteine-rich protein 3ENSDARG0000004339534
crip1 / cysteine-rich protein 1 / P50238* / P63254* / AL928654.3*ENSDARG0000005385816
zgc:195282 / CRIP3* / Q6Q6R3* / Q6Q6R5* / cysteine rich protein 3*ENSDARG0000007948811


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045214 sarcomere organization IMP
 biological_processGO:0060047 heart contraction IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart decreased contractility , abnormal
Show

 ZFA:0000154 sinus venosus sinus venosus increased accumulation blood , abnormal
Show

 ZFA:0005280 cardiac muscle cardiac muscle Z disc increased width , abnormal
cardiac muscle Z disc disorganized , abnormal
Show

 ZFA:0009316 cardiac muscle cell cardiac muscle cell sarcomere decreased thickness , abnormal
cardiac muscle cell sarcomere decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr