ENSDARG00000056619


Danio rerio

Features
Gene ID: ENSDARG00000056619
  
Biological name :arhgap42a
  
Synonyms : arhgap42a / Rho GTPase activating protein 42a
  
Possible biological names infered from orthology : A6NI28 / ARHGAP42 / B2RQE8 / Q9H2Q1 / Rho GTPase activating protein 42
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 22738939
Gene end: 22796064
  
Corresponding Affymetrix probe sets: Dr.6478.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000073601
Ensembl peptide - ENSDARP00000126225
NCBI entrez gene - 566275     See in Manteia.
RefSeq - NM_001202443
RefSeq Peptide - NP_001189372
swissprot - I3ITG1
swissprot - A0A140TAT9
ZFIN ID - ZDB-GENE-030131-8077
Ensembl - ENSDARG00000056619
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARHGAP42ENSGALG00000017196Gallus gallus
 A6NI28ENSG00000165895Homo sapiens
 B2RQE8ENSMUSG00000050730Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arhgap42b / Rho GTPase activating protein 42b / A6NI28* / Q9H2Q1* / ARHGAP42* / Rho GTPase activating protein 42*ENSDARG0000001065474
ophn1 / oligophrenin 1 / O60890* / Q99J31*ENSDARG0000003542042
arhgap10 / Rho GTPase activating protein 10 / A1A4S6* / Q6Y5D8*ENSDARG0000007832642
arhgap29b / Rho GTPase activating protein 29b / Q52LW3* / Q8CGF1* / ARHGAP29* / Rho GTPase activating protein 29* / Mus musculus Rho GTPase activating protein 29 (Arhgap29), transcript vari...ENSDARG0000001774816
arhgap29a / Rho GTPase activating protein 29a / Q52LW3* / Q8CGF1* / ARHGAP29* / Rho GTPase activating protein 29* / Mus musculus Rho GTPase activating protein 29 (Arhgap29), transcript vari...ENSDARG0000002632915
hmha1a / histocompatibility (minor) HA-1 a / Q92619* / ARHGAP45* / Rho GTPase activating protein 45*ENSDARG0000005249614
hmha1b / histocompatibility (minor) HA-1 b / Q92619* / Q3TBD2* / ARHGAP45* / Rho GTPase activating protein 45* / Mus musculus Rho GTPase activating protein 45 (Arhgap45), transcript variant 3, mRNA.*ENSDARG0000006204914
arhgap32b / Rho GTPase activating protein 32b / A7KAX9* / Q811P8* / ARHGAP32* / Rho GTPase activating protein 32*ENSDARG0000007418414
arhgap32a / Rho GTPase activating protein 32a / A7KAX9* / Q811P8* / ARHGAP32* / Rho GTPase activating protein 32*ENSDARG0000007533413
gmip / GEM interacting protein / Q6PGG2* / Q9P107*ENSDARG0000007724913
arhgap33 / Rho GTPase activating protein 33 / O14559* / Q80YF9*ENSDARG0000001133311
arhgap31 / Rho GTPase activating protein 31 / A6X8Z5* / Q2M1Z3*ENSDARG0000005947211
racgap1 / Rac GTPase activating protein 1 / Q9H0H5* / Q9WVM1*ENSDARG0000001546010
si:ch1073-416j23.1ENSDARG0000005593410
si:dkeyp-68b7.12 / Q7Z6I6* / ARHGAP30* / Rho GTPase activating protein 30*ENSDARG0000007484610
ralbp1 / ralA binding protein 1 / Q15311*ENSDARG000000786539
si:ch73-243b8.4ENSDARG000000951741


Protein motifs (from Interpro)
Interpro ID Name
 IPR000198  Rho GTPase-activating protein domain
 IPR001452  SH3 domain
 IPR001849  Pleckstrin homology domain
 IPR008936  Rho GTPase activation protein
 IPR011993  PH-like domain superfamily
 IPR027267  AH/BAR domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 molecular_functionGO:0005096 GTPase activator activity IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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