ENSGALG00000017196


Gallus gallus

Features
Gene ID: ENSGALG00000017196
  
Biological name :ARHGAP42
  
Synonyms : ARHGAP42 / Rho GTPase activating protein 42
  
Possible biological names infered from orthology : A6NI28 / B2RQE8 / Q9H2Q1
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 183296518
Gene end: 183451526
  
Corresponding Affymetrix probe sets: Gga.10226.1.S1_at (Chicken Array)   Gga.10226.1.S1_s_at (Chicken Array)   GgaAffx.11032.1.S1_at (Chicken Array)   GgaAffx.11032.2.S1_at (Chicken Array)   GgaAffx.25196.2.S1_at (Chicken Array)   GgaAffx.25196.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027741
NCBI entrez gene - 418990     See in Manteia.
RefSeq - XM_417185
swissprot - E1C8X0
Ensembl - ENSGALG00000017196
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arhgap42aENSDARG00000056619Danio rerio
 arhgap42bENSDARG00000010654Danio rerio
 A6NI28ENSG00000165895Homo sapiens
 B2RQE8ENSMUSG00000050730Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARHGAP10 / Rho GTPase activating protein 10 / A1A4S6* / Q6Y5D8*ENSGALG0000001003148
Q5ZMW5 / ARHGAP26 / Rho GTPase-activating protein 26 / Q6ZQ82* / Q9UNA1*ENSGALG0000003393847
OPHN1 / oligophrenin 1 / O60890* / Q99J31*ENSGALG0000002965246
ARHGAP29 / Rho GTPase activating protein 29 / Q52LW3* / Q8CGF1* / Mus musculus Rho GTPase activating protein 29 (Arhgap29), transcript variant 2, mRNA.*ENSGALG0000000568317
ARHGAP45 / minor histocompatibility protein HA-1 / Q3TBD2* / Q92619* / Rho GTPase activating protein 45* / Mus musculus Rho GTPase activating protein 45 (Arhgap45), transcript variant 3, mRNA.*ENSGALG0000003246914
ARHGAP31 / Rho GTPase activating protein 31 / A6X8Z5* / Q2M1Z3*ENSGALG0000001507712
RACGAP1 / Rac GTPase activating protein 1 / Q9H0H5* / Q9WVM1*ENSGALG0000003323110
ENSGALG000000112529
RALBP1 / ralA binding protein 1 / Q15311* / Q62172*ENSGALG000000084058
ARHGAP32 / Rho GTPase activating protein 32 / A7KAX9* / Q811P8*ENSGALG000000435116
ENSGALG000000454605
ENSGALG000000441714
ENSGALG000000442034
ENSGALG000000445354
ENSGALG000000446034
ENSGALG000000447584
ENSGALG000000454054
ENSGALG000000458544
ENSGALG000000458814
ENSGALG000000460314


Protein motifs (from Interpro)
Interpro ID Name
 IPR000198  Rho GTPase-activating protein domain
 IPR001452  SH3 domain
 IPR001849  Pleckstrin homology domain
 IPR008936  Rho GTPase activation protein
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003085 negative regulation of systemic arterial blood pressure IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0035024 negative regulation of Rho protein signal transduction IEA
 biological_processGO:0090630 activation of GTPase activity IEA
 biological_processGO:1904694 negative regulation of vascular smooth muscle contraction IEA
 molecular_functionGO:0005096 GTPase activator activity IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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