ENSDARG00000056840


Danio rerio

Features
Gene ID: ENSDARG00000056840
  
Biological name :otud5b
  
Synonyms : otud5b / OTU deubiquitinase 5b
  
Possible biological names infered from orthology : OTUD5 / OTU deubiquitinase 5 / OTU domain-containing protein 5 / Q3U2S4 / Q96G74
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 25681335
Gene end: 25689873
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105205
Ensembl peptide - ENSDARP00000152311
NCBI entrez gene - 445146     See in Manteia.
RefSeq - NM_001327765
RefSeq Peptide - NP_001314694
swissprot - F1QPN8
swissprot - Q6DC70
ZFIN ID - ZDB-GENE-040801-50
Ensembl - ENSDARG00000056840
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OTUD5ENSG00000068308Homo sapiens
 Otud5ENSMUSG00000031154Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q08BW0 / otud5a / OTU deubiquitinase 5a / OTUD5* / Q3U2S4* / Q96G74* / OTU deubiquitinase 5* / OTU domain-containing protein 5 *ENSDARG0000005900673
alg13 / ALG13, UDP-N-acetylglucosaminyltransferase subunit / Q9NP73*ENSDARG0000005437411
otud4 / OTU deubiquitinase 4 / B2RRE7* / Q01804* / OTU domain-containing protein 4 *ENSDARG0000007781011


Protein motifs (from Interpro)
Interpro ID Name
 IPR003323  OTU domain
 IPR031084  OTU domain-containing protein 5/Otubain-like deubiquitinase 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016579 protein deubiquitination IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000106 extension extension decreased thickness , abnormal
Show

 ZFA:0000155 somite somite fused with somite , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased size , abnormal
Show

 ZFA:0001115 trunk trunk bent , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr