ENSDARG00000056917


Danio rerio

Features
Gene ID: ENSDARG00000056917
  
Biological name :si:rp71-45g20.4
  
Synonyms : si:rp71-45g20.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 27855684
Gene end: 27857413
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000099598
Ensembl peptide - ENSDARP00000144544
Ensembl peptide - ENSDARP00000117189
Ensembl peptide - ENSDARP00000114299
NCBI entrez gene - 100006347     See in Manteia.
RefSeq - XM_001920858
RefSeq - XM_021478960
swissprot - E9QCK1
swissprot - A8WHX4
swissprot - A7MCJ1
ZFIN ID - ZDB-GENE-070912-709
Ensembl - ENSDARG00000056917
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:rp71-45g20.10ENSDARG0000005690798
si:rp71-45g20.11ENSDARG0000009429198
zgc:174354ENSDARG0000011399485
si:ch211-156l18.6ENSDARG0000007081284
si:dkey-23f9.13ENSDARG0000008855284
zgc:174353ENSDARG0000011236584
si:dkey-23f9.12ENSDARG0000009433583
CR450764.1ENSDARG0000010075480
si:dkey-27d5.6ENSDARG0000011059180
zgc:174354ENSDARG0000011182680
zgc:174353ENSDARG0000011507980
zgc:174355ENSDARG0000011388978
si:dkey-27d5.10ENSDARG0000009419676
BX005361.1ENSDARG0000011650052
si:ch211-198k9.6ENSDARG0000006980451
rbbp6 / retinoblastoma binding protein 6 / Q7Z6E9* / P97868* / E3 ubiquitin-protein ligase RBBP6 * / RB binding protein 6, ubiquitin ligase*ENSDARG0000003791949
zgc:77614 / zgc:174461ENSDARG0000009350849
BX005399.1ENSDARG0000009471749
CABZ01049825.1ENSDARG0000010124349
zgc:77614 / zgc:174461ENSDARG0000010956649


Protein motifs (from Interpro)
Interpro ID Name
 IPR014891  DWNN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr