ENSDARG00000112365


Danio rerio

Features
Gene ID: ENSDARG00000112365
  
Biological name :zgc:174353
  
Synonyms : zgc:174353
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 12362231
Gene end: 12364122
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130645
Ensembl peptide - ENSDARP00000146333
NCBI entrez gene - 100004335     See in Manteia.
RefSeq - XM_021472439
swissprot - E7FF55
swissprot - A0A0R4IAR9
ZFIN ID - ZDB-GENE-071004-121
Ensembl - ENSDARG00000112365
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-156l18.6ENSDARG0000007081298
si:dkey-23f9.13ENSDARG0000008855298
si:dkey-23f9.12ENSDARG0000009433598
zgc:174354ENSDARG0000011399498
zgc:174353ENSDARG0000011507994
CR450764.1ENSDARG0000010075492
si:dkey-27d5.6ENSDARG0000011059192
zgc:174354ENSDARG0000011182692
zgc:174355ENSDARG0000011388991
si:dkey-27d5.10ENSDARG0000009419690
si:rp71-45g20.10ENSDARG0000005690781
si:rp71-45g20.11ENSDARG0000009429181
si:rp71-45g20.4ENSDARG0000005691780
rbbp6 / retinoblastoma binding protein 6 / Q7Z6E9* / P97868* / E3 ubiquitin-protein ligase RBBP6 * / RB binding protein 6, ubiquitin ligase*ENSDARG0000003791953
si:dkey-23f9.11ENSDARG0000011287352
zgc:174353ENSDARG0000007747551
si:ch211-156l18.4ENSDARG0000011046051
si:dkey-23f9.7ENSDARG0000011056451
si:dkey-27d5.14ENSDARG0000011093951
si:dkey-27d5.3ENSDARG0000011124551


Protein motifs (from Interpro)
Interpro ID Name
 IPR001878  Zinc finger, CCHC-type
 IPR014891  DWNN domain
 IPR025829  Zinc knuckle CX2CX3GHX4C


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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