ENSDARG00000058646


Danio rerio

Features
Gene ID: ENSDARG00000058646
  
Biological name :ptprna
  
Synonyms : protein tyrosine phosphatase, receptor type, Na / ptprna
  
Possible biological names infered from orthology : protein tyrosine phosphatase, receptor type N / PTPRN / Q16849
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 7548533
Gene end: 7619622
  
Corresponding Affymetrix probe sets: Dr.5278.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000075984
NCBI entrez gene - 324790     See in Manteia.
RefSeq - NM_001130588
RefSeq - XM_017357652
RefSeq Peptide - NP_001124060
swissprot - F1R8X1
ZFIN ID - ZDB-GENE-030131-3511
Ensembl - ENSDARG00000058646
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTPRNENSGALG00000033811Gallus gallus
 PTPRNENSG00000054356Homo sapiens
 PtprnENSMUSG00000026204Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptprnb / protein tyrosine phosphatase, receptor type, Nb / PTPRN* / Q16849* / protein tyrosine phosphatase, receptor type N*ENSDARG0000007704758
ptprn2 / protein tyrosine phosphatase, receptor type, N polypeptide 2 / P80560* / Q92932* / protein tyrosine phosphatase, receptor type N2*ENSDARG0000003597043
ptpn11a / protein tyrosine phosphatase, non-receptor type 11, a / PTPN11* / P35235* / Q06124* / Tyrosine-protein phosphatase non-receptor type 11 * / protein tyrosine phosphatase, non-recep...ENSDARG0000002033415
ptpn6 / protein tyrosine phosphatase, non-receptor type 6 / P29350* / P29351*ENSDARG0000008904315
ptpn11b / protein tyrosine phosphatase, non-receptor type 11, bENSDARG0000001234014
ptpn5 / protein tyrosine phosphatase, non-receptor type 5 / P54829* / P54830* / Tyrosine-protein phosphatase non-receptor type 5 *ENSDARG0000007486611
ptprr / protein tyrosine phosphatase, receptor type, r / Q15256* / Q62132*ENSDARG0000010574411


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR021613  Protein-tyrosine phosphatase receptor IA-2 ectodomain
 IPR029021  Protein-tyrosine phosphatase-like
 IPR029403  RESP18 domain
 IPR033522  Receptor-type tyrosine-protein phosphatase-like N/N2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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