ENSDARG00000059961


Danio rerio

Features
Gene ID: ENSDARG00000059961
  
Biological name :chpf2
  
Synonyms : chondroitin polymerizing factor 2 / chpf2
  
Possible biological names infered from orthology : Q9P2E5
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 41421998
Gene end: 41433786
  
Corresponding Affymetrix probe sets: Dr.7066.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000078402
NCBI entrez gene - 100000654     See in Manteia.
swissprot - F1Q679
ZFIN ID - ZDB-GENE-030131-7797
Ensembl - ENSDARG00000059961
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHPF2ENSGALG00000036477Gallus gallus
 CHPF2ENSG00000033100Homo sapiens
 Chpf2ENSMUSG00000038181Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chpfa / chondroitin polymerizing factor aENSDARG0000007839260
chpfb / chondroitin polymerizing factor b / CHPF* / Q8IZ52* / Q6IQX7* / chondroitin polymerizing factor* / Chondroitin sulfate synthase 2 *ENSDARG0000007803755
chsy3 / chondroitin sulfate synthase 3 / Q70JA7*ENSDARG0000006947222
chsy1 / chondroitin sulfate synthase 1 / Q6ZQ11* / Q86X52*ENSDARG0000007902721
csgalnact1a / chondroitin sulfate N-acetylgalactosaminyltransferase 1a / Q8TDX6* / CSGALNACT1* / chondroitin sulfate N-acetylgalactosaminyltransferase 1*ENSDARG0000004053513
b4galnt4a / beta-1,4-N-acetyl-galactosaminyl transferase 4a / Q76KP1* / Q766D5* / B4GALNT4* / beta-1,4-N-acetyl-galactosaminyltransferase 4* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta...ENSDARG0000004615012
b4galnt3b / beta-1,4-N-acetyl-galactosaminyl transferase 3b / Q6L9W6* / Q6L8S8* / B4GALNT3* / beta-1,4-N-acetyl-galactosaminyltransferase 3* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSDARG0000005893912
csgalnact2 / chondroitin sulfate N-acetylgalactosaminyltransferase 2 / Q8C1F4* / Q8N6G5*ENSDARG0000006140012
b4galnt4b / beta-1,4-N-acetyl-galactosaminyl transferase 4b / Q76KP1* / Q766D5* / B4GALNT4* / beta-1,4-N-acetyl-galactosaminyltransferase 4* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta...ENSDARG0000007670112
csgalnact1b / chondroitin sulfate N-acetylgalactosaminyltransferase 1b / Q8TDX6* / CSGALNACT1* / chondroitin sulfate N-acetylgalactosaminyltransferase 1*ENSDARG0000008923311
b4galnt3a / beta-1,4-N-acetyl-galactosaminyl transferase 3a / Q6L9W6* / Q6L8S8* / B4GALNT3* / beta-1,4-N-acetyl-galactosaminyltransferase 3* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSDARG000000787499


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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