ENSDARG00000061400


Danio rerio

Features
Gene ID: ENSDARG00000061400
  
Biological name :csgalnact2
  
Synonyms : chondroitin sulfate N-acetylgalactosaminyltransferase 2 / csgalnact2
  
Possible biological names infered from orthology : Q8C1F4 / Q8N6G5
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 25569831
Gene end: 25581303
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000081967
NCBI entrez gene - 560826     See in Manteia.
RefSeq - NM_001126397
RefSeq Peptide - NP_001119869
swissprot - A8E7C8
ZFIN ID - ZDB-GENE-030131-5186
Ensembl - ENSDARG00000061400
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSGALNACT2ENSGALG00000002543Gallus gallus
 Q8N6G5ENSG00000169826Homo sapiens
 Q8C1F4ENSMUSG00000042042Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
csgalnact1a / chondroitin sulfate N-acetylgalactosaminyltransferase 1a / Q8TDX6* / CSGALNACT1* / chondroitin sulfate N-acetylgalactosaminyltransferase 1*ENSDARG0000004053558
csgalnact1b / chondroitin sulfate N-acetylgalactosaminyltransferase 1b / Q8TDX6* / CSGALNACT1* / chondroitin sulfate N-acetylgalactosaminyltransferase 1*ENSDARG0000008923339
chsy3 / chondroitin sulfate synthase 3 / Q70JA7*ENSDARG0000006947228
chsy1 / chondroitin sulfate synthase 1 / Q6ZQ11* / Q86X52*ENSDARG0000007902725
chpfa / chondroitin polymerizing factor aENSDARG0000007839219
chpf2 / chondroitin polymerizing factor 2 / Q9P2E5*ENSDARG0000005996118
b4galnt4b / beta-1,4-N-acetyl-galactosaminyl transferase 4b / Q76KP1* / Q766D5* / B4GALNT4* / beta-1,4-N-acetyl-galactosaminyltransferase 4* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta...ENSDARG0000007670118
chpfb / chondroitin polymerizing factor b / CHPF* / Q8IZ52* / Q6IQX7* / chondroitin polymerizing factor* / Chondroitin sulfate synthase 2 *ENSDARG0000007803718
b4galnt4a / beta-1,4-N-acetyl-galactosaminyl transferase 4a / Q76KP1* / Q766D5* / B4GALNT4* / beta-1,4-N-acetyl-galactosaminyltransferase 4* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta...ENSDARG0000004615017
b4galnt3b / beta-1,4-N-acetyl-galactosaminyl transferase 3b / Q6L9W6* / Q6L8S8* / B4GALNT3* / beta-1,4-N-acetyl-galactosaminyltransferase 3* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSDARG0000005893916
b4galnt3a / beta-1,4-N-acetyl-galactosaminyl transferase 3a / Q6L9W6* / Q6L8S8* / B4GALNT3* / beta-1,4-N-acetyl-galactosaminyltransferase 3* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSDARG0000007874916


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015012 heparan sulfate proteoglycan biosynthetic process IGI
 biological_processGO:0050650 chondroitin sulfate proteoglycan biosynthetic process IGI
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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