ENSDARG00000089233


Danio rerio

Features
Gene ID: ENSDARG00000089233
  
Biological name :csgalnact1b
  
Synonyms : chondroitin sulfate N-acetylgalactosaminyltransferase 1b / csgalnact1b
  
Possible biological names infered from orthology : chondroitin sulfate N-acetylgalactosaminyltransferase 1 / CSGALNACT1 / Q8BJQ9 / Q8TDX6
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 635704
Gene end: 648289
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000112348
NCBI entrez gene - 101886904     See in Manteia.
swissprot - F1RD96
ZFIN ID - ZDB-GENE-130530-957
Ensembl - ENSDARG00000089233
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSGALNACT1ENSGALG00000010125Gallus gallus
 Q8TDX6ENSG00000147408Homo sapiens
 Q8BJQ9ENSMUSG00000036356Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
csgalnact1a / chondroitin sulfate N-acetylgalactosaminyltransferase 1a / Q8TDX6* / CSGALNACT1* / chondroitin sulfate N-acetylgalactosaminyltransferase 1*ENSDARG0000004053549
csgalnact2 / chondroitin sulfate N-acetylgalactosaminyltransferase 2 / Q8C1F4* / Q8N6G5*ENSDARG0000006140044
chsy3 / chondroitin sulfate synthase 3 / Q70JA7*ENSDARG0000006947222
chsy1 / chondroitin sulfate synthase 1 / Q6ZQ11* / Q86X52*ENSDARG0000007902722
chpfb / chondroitin polymerizing factor b / CHPF* / Q8IZ52* / Q6IQX7* / chondroitin polymerizing factor* / Chondroitin sulfate synthase 2 *ENSDARG0000007803718
chpf2 / chondroitin polymerizing factor 2 / Q9P2E5*ENSDARG0000005996117
chpfa / chondroitin polymerizing factor aENSDARG0000007839217
b4galnt4a / beta-1,4-N-acetyl-galactosaminyl transferase 4a / Q76KP1* / Q766D5* / B4GALNT4* / beta-1,4-N-acetyl-galactosaminyltransferase 4* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta...ENSDARG0000004615016
b4galnt4b / beta-1,4-N-acetyl-galactosaminyl transferase 4b / Q76KP1* / Q766D5* / B4GALNT4* / beta-1,4-N-acetyl-galactosaminyltransferase 4* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta...ENSDARG0000007670116
b4galnt3b / beta-1,4-N-acetyl-galactosaminyl transferase 3b / Q6L9W6* / Q6L8S8* / B4GALNT3* / beta-1,4-N-acetyl-galactosaminyltransferase 3* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSDARG0000005893914
b4galnt3a / beta-1,4-N-acetyl-galactosaminyl transferase 3a / Q6L9W6* / Q6L8S8* / B4GALNT3* / beta-1,4-N-acetyl-galactosaminyltransferase 3* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSDARG0000007874914


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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