ENSGALG00000010125


Gallus gallus

Features
Gene ID: ENSGALG00000010125
  
Biological name :CSGALNACT1
  
Synonyms : chondroitin sulfate N-acetylgalactosaminyltransferase 1 / CSGALNACT1
  
Possible biological names infered from orthology : Q8BJQ9 / Q8TDX6
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 34344526
Gene end: 34358907
  
Corresponding Affymetrix probe sets: Gga.12155.1.S1_at (Chicken Array)   Gga.13373.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016448
NCBI entrez gene - 422488     See in Manteia.
RefSeq - XM_004941002
RefSeq - XM_015276645
RefSeq - XM_015276646
RefSeq - XM_015276648
RefSeq - XM_015276649
RefSeq - XM_015276650
RefSeq - XM_015276651
RefSeq - XM_015276652
RefSeq - XM_004941001
swissprot - F1NB01
Ensembl - ENSGALG00000010125
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 csgalnact1aENSDARG00000040535Danio rerio
 csgalnact1bENSDARG00000089233Danio rerio
 Q8TDX6ENSG00000147408Homo sapiens
 Q8BJQ9ENSMUSG00000036356Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CSGALNACT2 / chondroitin sulfate N-acetylgalactosaminyltransferase 2 / Q8C1F4* / Q8N6G5*ENSGALG0000000254360
CHSY1 / chondroitin sulfate synthase 1 / Q6ZQ11* / Q86X52*ENSGALG0000002646827
CHSY3 / chondroitin sulfate synthase 3 / Q5DTK1* / Q70JA7*ENSGALG0000002689923
CHPF / chondroitin polymerizing factor / Q6IQX7* / Q8IZ52* / Chondroitin sulfate synthase 2 *ENSGALG0000003291518
B4GALNT4 / beta-1,4-N-acetyl-galactosaminyltransferase 4 / Q766D5* / Q76KP1* / N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 *ENSGALG0000000425017
B4GALNT3 / beta-1,4-N-acetyl-galactosaminyltransferase 3 / Q6L8S8* / Q6L9W6* / Beta-1,4-N-acetylgalactosaminyltransferase 3 *ENSGALG0000001298815
CHPF2 / chondroitin polymerizing factor 2 / Q9P2E5*ENSGALG0000003647712


Protein motifs (from Interpro)
Interpro ID Name
 IPR008428  Chondroitin N-acetylgalactosaminyltransferase
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001958 endochondral ossification IEA
 biological_processGO:0019276 UDP-N-acetylgalactosamine metabolic process IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0030204 chondroitin sulfate metabolic process IEA
 biological_processGO:0030206 chondroitin sulfate biosynthetic process IEA
 biological_processGO:0046398 UDP-glucuronate metabolic process IEA
 biological_processGO:0050653 chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
 biological_processGO:0051216 cartilage development IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032580 Golgi cisterna membrane IEA
 molecular_functionGO:0008376 acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0008955 peptidoglycan glycosyltransferase activity IEA
 molecular_functionGO:0015020 glucuronosyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0047237 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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