ENSDARG00000060257


Danio rerio

Features
Gene ID: ENSDARG00000060257
  
Biological name :zranb1a
  
Synonyms : zinc finger, RAN-binding domain containing 1a / zranb1a
  
Possible biological names infered from orthology : Q7M760 / Q9UGI0 / zinc finger, RAN-binding domain containing 1 / zinc finger RANBP2-type containing 1 / ZRANB1
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 47044707
Gene end: 47072007
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000079149
Ensembl peptide - ENSDARP00000147539
swissprot - E7EYV8
ZFIN ID - ZDB-GENE-100212-3
Ensembl - ENSDARG00000060257
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZRANB1ENSGALG00000031474Gallus gallus
 Q9UGI0ENSG00000019995Homo sapiens
 Q7M760ENSMUSG00000030967Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A0JMQ9 / zranb1b / zinc finger, RAN-binding domain containing 1bENSDARG0000006319078
OTUD7A / si:dkey-37f18.2 / Q8R554* / Q8TE49* / OTU deubiquitinase 7A* / OTU domain-containing protein 7A *ENSDARG0000004555618
otud7b / OTU deubiquitinase 7B / B2RUR8* / Q6GQQ9* / OTU domain-containing protein 7B *ENSDARG0000001722017
tnfaip3 / tumor necrosis factor, alpha-induced protein 3 / P21580* / Q60769* / TNF alpha induced protein 3*ENSDARG0000002777717


Protein motifs (from Interpro)
Interpro ID Name
 IPR001876  Zinc finger, RanBP2-type
 IPR003323  OTU domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IBA
 biological_processGO:0007420 brain development IGI
 biological_processGO:0016477 cell migration IBA
 biological_processGO:0030177 positive regulation of Wnt signaling pathway IBA
 biological_processGO:0035523 protein K29-linked deubiquitination IBA
 biological_processGO:0071947 protein deubiquitination involved in ubiquitin-dependent protein catabolic process IBA
 biological_processGO:1990168 protein K33-linked deubiquitination IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070530 K63-linked polyubiquitin modification-dependent protein binding IBA


Pathways (from Reactome)
Pathway description
Ovarian tumor domain proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain decreased size , abnormal
brain edematous , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased size , abnormal
Show

 ZFA:0001114 head head malformed , abnormal
head decreased size , abnormal
Show

 ZFA:0001115 trunk trunk curved ventral , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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