ENSDARG00000061579


Danio rerio

Features
Gene ID: ENSDARG00000061579
  
Biological name :myo1cb
  
Synonyms : myo1cb / myosin Ic, paralog b
  
Possible biological names infered from orthology : MYO1C / myosin IC / O00159 / Q9WTI7 / Unconventional myosin-Ic
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 28268135
Gene end: 28352897
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000143801
Ensembl peptide - ENSDARP00000149786
Ensembl peptide - ENSDARP00000082359
Ensembl peptide - ENSDARP00000126580
Ensembl peptide - ENSDARP00000126947
NCBI entrez gene - 566459     See in Manteia.
RefSeq - NM_001317189
RefSeq - XM_005157667
RefSeq - XM_005157668
RefSeq - XM_009291755
RefSeq Peptide - NP_001304118
swissprot - R4GDM7
swissprot - R4GEN4
swissprot - E7F5R7
swissprot - A0A286Y9H2
ZFIN ID - ZDB-GENE-090429-3
Ensembl - ENSDARG00000061579
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MYO1CENSGALG00000002709Gallus gallus
 MYO1CENSG00000197879Homo sapiens
 Myo1cENSMUSG00000017774Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
myo1ca / A5PF48 / myosin Ic, paralog a / MYO1C* / Q9WTI7* / O00159* / myosin IC* / Unconventional myosin-Ic *ENSDARG0000002092473
myo1hb / myosin IHb / MYO1H* / Q8N1T3* / Q9D6A1* / myosin IH* / Unconventional myosin-Ih *ENSDARG0000007860363
myo1ha / myosin IHa / MYO1H* / Q8N1T3* / Q9D6A1* / myosin IH* / Unconventional myosin-Ih *ENSDARG0000006196862
myo1b / myosin IB / O43795* / P46735*ENSDARG0000002469445
MYO1G / si:dkeyp-92c9.3 / B0I1T2* / Q5SUA5* / myosin IG* / Unconventional myosin-Ig *ENSDARG0000003610440
MYO1D / si:ch211-94l19.4 / O94832* / Q5SYD0* / myosin ID* / Unconventional myosin-Id *ENSDARG0000003686340
myo1eb / myosin IE, bENSDARG0000000913337
myo1f / myosin IF / O00160*ENSDARG0000007873437
myo1ea / myosin IE, a / MYO1E* / Q12965* / E9Q634* / myosin IE* / Unconventional myosin-Ie *ENSDARG0000003617936
myo15aa / myosin XVAa / Myo15* / MYO15A* / Q9UKN7* / Q9QZZ4* / myosin XVA* / Unconventional myosin-XV *ENSDARG0000007529231
myo15ab / myosin XVAb / Myo15* / MYO15A* / Q9UKN7* / Q9QZZ4* / myosin XVA* / Unconventional myosin-XV *ENSDARG0000007847429
myo15b / myosin XVBENSDARG000000748525


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR001609  Myosin head, motor domain
 IPR010926  Class I myosin tail homology domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0032835 glomerulus development IMP
 cellular_componentGO:0016459 myosin complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA


Pathways (from Reactome)
Pathway description
Regulation of actin dynamics for phagocytic cup formation
B-WICH complex positively regulates rRNA expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000112 gut gut edematous , abnormal
Show

 ZFA:0000114 heart heart edematous , abnormal
Show

 ZFA:0000150 pronephric duct pronephric duct physical object quality , abnormal
Show

 ZFA:0001558 pronephric tubule pronephric tubule dilated , abnormal
Show

 ZFA:0001673 pronephric podocyte pronephric podocyte morphology , abnormal
Show

 ZFA:0005254 renal glomerular capsule renal glomerular capsule increased size , abnormal
Show

 ZFA:0005313 pronephric glomerular basement membrane pronephric glomerular basement membrane increased thickness , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr