ENSDARG00000061656


Danio rerio

Features
Gene ID: ENSDARG00000061656
  
Biological name :ptpdc1a
  
Synonyms : protein tyrosine phosphatase domain containing 1a / ptpdc1a
  
Possible biological names infered from orthology : A2A3K4 / protein tyrosine phosphatase domain containing 1 / Protein tyrosine phosphatase domain-containing protein 1 / PTPDC1 / Q6NZK8
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 27511277
Gene end: 27537661
  
Corresponding Affymetrix probe sets: Dr.13445.1.A1_at (Zebrafish Array)   NM_001080596_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000082610
Ensembl peptide - ENSDARP00000142401
Ensembl peptide - ENSDARP00000142115
NCBI entrez gene - 565773     See in Manteia.
RefSeq - NM_001080596
RefSeq Peptide - NP_001074065
swissprot - A0A140LGM2
swissprot - A0A140LFU0
swissprot - F1QYQ8
ZFIN ID - ZDB-GENE-070112-632
Ensembl - ENSDARG00000061656
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTPDC1ENSGALG00000005128Gallus gallus
 A2A3K4ENSG00000158079Homo sapiens
 Ptpdc1ENSMUSG00000038042Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptpdc1b / protein tyrosine phosphatase domain containing 1b / A2A3K4* / PTPDC1* / Q6NZK8* / protein tyrosine phosphatase domain containing 1* / Protein tyrosine phosphatase domain-containin...ENSDARG0000005887346
zgc:77752ENSDARG0000004238731


Protein motifs (from Interpro)
Interpro ID Name
 IPR000340  Dual specificity phosphatase, catalytic domain
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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