ENSGALG00000005128


Gallus gallus

Features
Gene ID: ENSGALG00000005128
  
Biological name :PTPDC1
  
Synonyms : protein tyrosine phosphatase domain containing 1 / PTPDC1
  
Possible biological names infered from orthology : A2A3K4 / Protein tyrosine phosphatase domain-containing protein 1 / Q6NZK8
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 6108349
Gene end: 6117173
  
Corresponding Affymetrix probe sets: GgaAffx.3204.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000035493
NCBI entrez gene - 415979     See in Manteia.
RefSeq - XM_004944544
RefSeq - XM_004944547
RefSeq - XM_004944548
RefSeq - XM_414322
RefSeq - XM_004944540
swissprot - E1C6I5
Ensembl - ENSGALG00000005128
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptpdc1aENSDARG00000061656Danio rerio
 ptpdc1bENSDARG00000058873Danio rerio
 A2A3K4ENSG00000158079Homo sapiens
 Ptpdc1ENSMUSG00000038042Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000340  Dual specificity phosphatase, catalytic domain
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR020422  Dual specificity protein phosphatase domain
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0060271 cilium assembly IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IBA
 molecular_functionGO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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