ENSDARG00000062165


Danio rerio

Features
Gene ID: ENSDARG00000062165
  
Biological name :tub
  
Synonyms : tub / tubby bipartite transcription factor
  
Possible biological names infered from orthology : P50586 / P50607
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 27898091
Gene end: 28058520
  
Corresponding Affymetrix probe sets: Dr.22554.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000142731
Ensembl peptide - ENSDARP00000157255
Ensembl peptide - ENSDARP00000156208
Ensembl peptide - ENSDARP00000142794
Ensembl peptide - ENSDARP00000084007
NCBI entrez gene - 568677     See in Manteia.
swissprot - E7F015
swissprot - A0A1D5NSH9
swissprot - A0A1D5NSB8
ZFIN ID - ZDB-GENE-121009-1
Ensembl - ENSDARG00000062165
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TUBENSGALG00000005986Gallus gallus
 TUBENSG00000166402Homo sapiens
 TubENSMUSG00000031028Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zmp:0000000711 / TULP3* / O75386* / tubby like protein 3*ENSDARG0000006367261
si:dkey-220f10.4 / TULP2* / O00295* / P46686* / tubby like protein 2*ENSDARG0000006290245
tulp1a / tubby like protein 1a / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG0000007529543
tulp1b / tubby like protein 1b / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG0000007821041
tulp4a / tubby like protein 4a / TULP4* / Q9JIL5* / Q9NRJ4* / tubby like protein 4*ENSDARG0000004591123
tulp4b / tubby like protein 4b / TULP4* / Q9JIL5* / Q9NRJ4* / tubby like protein 4*ENSDARG0000006305622
wdr35 / WD repeat domain 35 / Q8BND3* / Q9P2L0*ENSDARG0000006926919


Protein motifs (from Interpro)
Interpro ID Name
 IPR000007  Tubby, C-terminal
 IPR005398  Tubby, N-terminal
 IPR018066  Tubby, C-terminal, conserved site
 IPR025659  Tubby-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0097500 receptor localization to non-motile cilium IBA
 biological_processGO:1903546 protein localization to photoreceptor outer segment IBA
 cellular_componentGO:0005929 cilium IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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