ENSDARG00000063056


Danio rerio

Features
Gene ID: ENSDARG00000063056
  
Biological name :tulp4b
  
Synonyms : tubby like protein 4b / tulp4b
  
Possible biological names infered from orthology : Q9JIL5 / Q9NRJ4 / tubby like protein 4 / TULP4
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 8183393
Gene end: 8211012
  
Corresponding Affymetrix probe sets: Dr.11355.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000086251
Ensembl peptide - ENSDARP00000129724
swissprot - E7EZ31
swissprot - X1WHL1
ZFIN ID - ZDB-GENE-130530-708
Ensembl - ENSDARG00000063056
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TULP4ENSGALG00000037377Gallus gallus
 TULP4ENSG00000130338Homo sapiens
 Tulp4ENSMUSG00000034377Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tulp4a / tubby like protein 4a / TULP4* / Q9JIL5* / Q9NRJ4* / tubby like protein 4*ENSDARG0000004591165
wdr35 / WD repeat domain 35 / Q8BND3* / Q9P2L0*ENSDARG000000692697
tub / tubby bipartite transcription factor / P50586* / P50607*ENSDARG000000621656
zmp:0000000711 / TULP3* / O75386* / tubby like protein 3*ENSDARG000000636726
si:dkey-220f10.4 / TULP2* / O00295* / P46686* / tubby like protein 2*ENSDARG000000629025
tulp1a / tubby like protein 1a / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG000000752955
tulp1b / tubby like protein 1b / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG000000782105


Protein motifs (from Interpro)
Interpro ID Name
 IPR000007  Tubby, C-terminal
 IPR001680  WD40 repeat
 IPR008983  Tumour necrosis factor-like domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain
 IPR025659  Tubby-like, C-terminal
 IPR027267  AH/BAR domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0061512 protein localization to cilium IBA
 cellular_componentGO:0005929 cilium IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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