ENSDARG00000062902


Danio rerio

Features
Gene ID: ENSDARG00000062902
  
Biological name :si:dkey-220f10.4
  
Synonyms : si:dkey-220f10.4
  
Possible biological names infered from orthology : O00295 / P46686 / tubby like protein 2 / TULP2
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 20618336
Gene end: 20625630
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000078442
Ensembl peptide - ENSDARP00000085885
NCBI entrez gene - 564717     See in Manteia.
swissprot - F1QQA5
swissprot - Q1L8C0
ZFIN ID - ZDB-GENE-030131-9651
Ensembl - ENSDARG00000062902
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TULP2ENSG00000104804Homo sapiens
 Tulp2ENSMUSG00000023467Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tub / tubby bipartite transcription factor / P50586* / P50607*ENSDARG0000006216541
zmp:0000000711 / TULP3* / O75386* / tubby like protein 3*ENSDARG0000006367238
tulp1a / tubby like protein 1a / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG0000007529536
tulp1b / tubby like protein 1b / TULP1* / O00294* / Q9Z273* / tubby like protein 1*ENSDARG0000007821035
tulp4a / tubby like protein 4a / TULP4* / Q9JIL5* / Q9NRJ4* / tubby like protein 4*ENSDARG0000004591118
tulp4b / tubby like protein 4b / TULP4* / Q9JIL5* / Q9NRJ4* / tubby like protein 4*ENSDARG0000006305618
wdr35 / WD repeat domain 35 / Q8BND3* / Q9P2L0*ENSDARG0000006926915


Protein motifs (from Interpro)
Interpro ID Name
 IPR000007  Tubby, C-terminal
 IPR005398  Tubby, N-terminal
 IPR018066  Tubby, C-terminal, conserved site
 IPR025659  Tubby-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0097500 receptor localization to non-motile cilium IBA
 biological_processGO:1903546 protein localization to photoreceptor outer segment IBA
 cellular_componentGO:0005929 cilium IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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