ENSDARG00000062325


Danio rerio

Features
Gene ID: ENSDARG00000062325
  
Biological name :shank2
  
Synonyms : SH3 and multiple ankyrin repeat domains 2 / shank2
  
Possible biological names infered from orthology : Q80Z38 / Q9UPX8 / SH3 and multiple ankyrin repeat domains protein 2
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 14165447
Gene end: 14366077
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000118220
NCBI entrez gene - 567595     See in Manteia.
RefSeq - NM_001128347
RefSeq Peptide - NP_001121819
swissprot - A2AV32
ZFIN ID - ZDB-GENE-061207-58
Ensembl - ENSDARG00000062325
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038779Gallus gallus
 ENSGALG00000035916Gallus gallus
 Q9UPX8ENSG00000162105Homo sapiens
 Q80Z38ENSMUSG00000037541Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
shank3b / SH3 and multiple ankyrin repeat domains 3b / SHANK3* / Q4ACU6* / SH3 and multiple ankyrin repeat domains 3* / SH3 and multiple ankyrin repeat domains protein 3 *ENSDARG0000006305437
shank3a / SH3 and multiple ankyrin repeat domains 3a / SHANK3* / Q4ACU6* / SH3 and multiple ankyrin repeat domains 3* / SH3 and multiple ankyrin repeat domains protein 3 *ENSDARG0000006333235
si:ch1073-450f2.1ENSDARG0000010244335
shank1 / SH3 and multiple ankyrin repeat domains 1 / D3YZU1* / Q9Y566* / SH3 and multiple ankyrin repeat domains protein 1 *ENSDARG0000006053924


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001478  PDZ domain
 IPR001660  Sterile alpha motif domain
 IPR002110  Ankyrin repeat
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR020683  Ankyrin repeat-containing domain
 IPR032425  Talin, N-terminal F0 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000055459 dlgap3 / discs, large (Drosophila) homolog-associated protein 3 / O95886* / Q6PFD5* / DLG associated protein 3* / Disks large-associated protein 3 *  / complex
 ENSDARG00000016016 dbnlb / drebrin-like b / DBNL* / Q9UJU6* / drebrin like*  / complex / reaction
 ENSDARG00000008170 dbnla / drebrin-like a / DBNL* / Q9UJU6* / Q62418* / drebrin like* / Drebrin-like protein *  / complex / reaction






 

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