ENSDARG00000060539


Danio rerio
domainshank1ankyrinshpdzrepeatrepeat-containingtalinn-terminalfneurexinsneuroligins

Features
Gene ID: ENSDARG00000060539
  
Biological name :shank1
  
Synonyms : SH3 and multiple ankyrin repeat domains 1 / shank1
  
Possible biological names infered from orthology : D3YZU1 / Q9Y566 / SH3 and multiple ankyrin repeat domains protein 1
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 30714111
Gene end: 30861177
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128093
swissprot - X1WCZ6
ZFIN ID - ZDB-GENE-130530-691
Ensembl - ENSDARG00000060539
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9Y566ENSG00000161681Homo sapiens
 D3YZU1ENSMUSG00000038738Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
shank2 / SH3 and multiple ankyrin repeat domains 2 / Q80Z38* / Q9UPX8* / SH3 and multiple ankyrin repeat domains protein 2 *ENSDARG0000006232550
shank3b / SH3 and multiple ankyrin repeat domains 3b / SHANK3* / Q4ACU6* / SH3 and multiple ankyrin repeat domains 3* / SH3 and multiple ankyrin repeat domains protein 3 *ENSDARG0000006305449
shank3a / SH3 and multiple ankyrin repeat domains 3a / SHANK3* / Q4ACU6* / SH3 and multiple ankyrin repeat domains 3* / SH3 and multiple ankyrin repeat domains protein 3 *ENSDARG0000006333241
si:ch1073-450f2.1ENSDARG0000010244321


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001478  PDZ domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR032425  Talin, N-terminal F0 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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