ENSDARG00000063264


Danio rerio

Features
Gene ID: ENSDARG00000063264
  
Biological name :pcdh9
  
Synonyms : pcdh9 / protocadherin 9
  
Possible biological names infered from orthology : Q9HC56
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 4872883
Gene end: 4984243
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000125820
Ensembl peptide - ENSDARP00000145020
Ensembl peptide - ENSDARP00000086722
NCBI entrez gene - 100004118     See in Manteia.
RefSeq - XM_021471700
swissprot - E7FBE3
swissprot - I3ISE5
ZFIN ID - ZDB-GENE-091015-1
Ensembl - ENSDARG00000063264
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCDH9ENSGALG00000016908Gallus gallus
 PCDH9ENSG00000184226Homo sapiens
 Pcdh9ENSMUSG00000055421Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcdh11 / protocadherin 11 / Q9BZA7* / Q9BZA8* / PCDH11Y* / PCDH11X* / protocadherin 11 X-linked* / protocadherin 11 Y-linked*ENSDARG0000009865258
pcdh7b / protocadherin 7b / PCDH7* / O60245* / protocadherin 7*ENSDARG0000006061038
pcdh1a / protocadherin 1a / PCDH1* / Q08174* / protocadherin 1*ENSDARG0000006272038
pcdh1b / protocadherin 1b / PCDH1* / Q08174* / protocadherin 1*ENSDARG0000003617537
pcdh7a / protocadherin 7aENSDARG0000007889837
pcdh20 / protocadherin 20 / Q8N6Y1* / AL592490.1*ENSDARG0000003642432
pcdh20 / protocadherin 20ENSDARG0000010191027
pcdh10b / protocadherin 10bENSDARG0000010282424
pcdh2ab12 / protocadherin 2 alpha b 12 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* ...ENSDARG0000010408024
pcdh2ab2 / protocadherin 2 alpha b2 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q...ENSDARG0000003769123
pcdh1g9 / protocadherin 1 gamma 9 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q9Y...ENSDARG0000005751923
pcdh2aa15 / protocadherin 2 alpha a 15 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* ...ENSDARG0000008813623
pcdh2ab1 / pcdh2ab8 / protocadherin 2 alpha b 8 / PCDHA3* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* /...ENSDARG0000008987423
pcdh2ab6 / protocadherin 2 alpha b 6 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / ...ENSDARG0000009104323
pcdh2ab2 / protocadherin 2 alpha b2 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q...ENSDARG0000009946823
si:ch73-379j16.2 / PCDHA1* / PCDHA5* / O88689* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q9Y5H9* / Q9Y5I0* / ...ENSDARG0000009953523
pcdh2ab3 / protocadherin 2 alpha b 3 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / ...ENSDARG0000010271923
pcdh1a3 / pcdh1a6 / protocadherin 1 alpha 3 / PCDHA3* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y...ENSDARG0000010459823
BX957322.3ENSDARG0000010735323
pcdh15b / protocadherin-related 15b / Q99PJ1* / PCDH15* / Q96QU1* / Protocadherin-15 * / protocadherin related 15*ENSDARG0000000812722


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR013585  Protocadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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