ENSDARG00000068114


Danio rerio

Features
Gene ID: ENSDARG00000068114
  
Biological name :f11r.2
  
Synonyms : f11r.2 / F11 receptor, tandem duplicate 2
  
Possible biological names infered from orthology : F11R / F11 receptor / Junctional adhesion molecule A / O88792 / Q9Y624
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 29820266
Gene end: 29825846
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000089087
Ensembl peptide - ENSDARP00000114667
NCBI entrez gene - 100005566     See in Manteia.
RefSeq - NM_001082982
RefSeq Peptide - NP_001076451
swissprot - A3KNL2
swissprot - A2BIL5
ZFIN ID - ZDB-GENE-060531-67
Ensembl - ENSDARG00000068114
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 F11RENSG00000158769Homo sapiens
 F11rENSMUSG00000038235Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
f11r.1 / F11 receptor, tandem duplicate 1 / F11R* / O88792* / Q9Y624* / F11 receptor* / Junctional adhesion molecule A *ENSDARG0000001732056
jam3a / junctional adhesion molecule 3a / JAM3* / Q9BX67* / Q9D8B7* / junctional adhesion molecule 3* / Junctional adhesion molecule C *ENSDARG0000011458928
jam3b / junctional adhesion molecule 3b / JAM3* / Q9BX67* / Q9D8B7* / junctional adhesion molecule 3* / Junctional adhesion molecule C *ENSDARG0000006179427
jam2a / junctional adhesion molecule 2a / JAM2* / P57087* / Q9JI59* / junctional adhesion molecule 2* / Junctional adhesion molecule B *ENSDARG0000005899624
jam2b / junctional adhesion molecule 2b / JAM2* / P57087* / Q9JI59* / junctional adhesion molecule 2* / Junctional adhesion molecule B *ENSDARG0000007907124


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Cell surface interactions at the vascular wall
Integrin cell surface interactions
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
Tight junction interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000021225 prkci / Q90XF2 / protein kinase C, iota / P41743* / Q62074*  / reaction / complex
 ENSDARG00000017320 f11r.1 / F11 receptor, tandem duplicate 1 / F11R* / O88792* / Q9Y624* / F11 receptor* / Junctional adhesion molecule A *  / complex / reaction
 ENSDARG00000068114 f11r.2 / F11 receptor, tandem duplicate 2 / F11R* / O88792* / Q9Y624* / F11 receptor* / Junctional adhesion molecule A *  / complex / reaction
 ENSDARG00000016939 itgb2 / integrin, beta 2 / Itgb2l* / P05107* / Q3UV74* / integrin subunit beta 2* / Integrin beta-2-like protein *  / complex / reaction






 

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