ENSDARG00000114589


Danio rerio

Features
Gene ID: ENSDARG00000114589
  
Biological name :jam3a
  
Synonyms : jam3a / junctional adhesion molecule 3a
  
Possible biological names infered from orthology : JAM3 / junctional adhesion molecule 3 / Junctional adhesion molecule C / Q9BX67 / Q9D8B7
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 19293744
Gene end: 19320615
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000150214
Ensembl peptide - ENSDARP00000105600
Ensembl peptide - ENSDARP00000147562
Ensembl peptide - ENSDARP00000149766
NCBI entrez gene - 797651     See in Manteia.
RefSeq - XM_001338087
RefSeq - XM_021466393
swissprot - F1QYW3
ZFIN ID - ZDB-GENE-070424-177
Ensembl - ENSDARG00000114589
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 JAM3ENSGALG00000001472Gallus gallus
 JAM3ENSG00000166086Homo sapiens
 Jam3ENSMUSG00000031990Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
jam3b / junctional adhesion molecule 3b / JAM3* / Q9BX67* / Q9D8B7* / junctional adhesion molecule 3* / Junctional adhesion molecule C *ENSDARG0000006179456
f11r.1 / F11 receptor, tandem duplicate 1 / F11R* / O88792* / Q9Y624* / F11 receptor* / Junctional adhesion molecule A *ENSDARG0000001732031
jam2b / junctional adhesion molecule 2b / JAM2* / P57087* / Q9JI59* / junctional adhesion molecule 2* / Junctional adhesion molecule B *ENSDARG0000007907129
f11r.2 / F11 receptor, tandem duplicate 2 / F11R* / O88792* / Q9Y624* / F11 receptor* / Junctional adhesion molecule A *ENSDARG0000006811427
jam2a / junctional adhesion molecule 2a / JAM2* / P57087* / Q9JI59* / junctional adhesion molecule 2* / Junctional adhesion molecule B *ENSDARG0000005899624


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Cell surface interactions at the vascular wall
Integrin cell surface interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000071863 itgb1a / integrin, beta 1a / ITGB1* / P05556* / P09055* / Integrin beta-1 * / integrin subunit beta 1*  / complex / reaction
 ENSDARG00000002956 si:dkey-32n7.4 / ITGAD* / ITGAM* / ITGAX* / Q13349* / P11215* / P20702* / Q9QXH4* / Q3V0T4* / integrin alpha M* / Integrin alpha-X * / Integrin alpha-D * / integrin subunit alpha X* / integ...  / complex / reaction
 ENSDARG00000079071 jam2b / junctional adhesion molecule 2b / JAM2* / P57087* / Q9JI59* / junctional adhesion molecule 2* / Junctional adhesion molecule B *  / complex / reaction
 ENSDARG00000114589 jam3a / junctional adhesion molecule 3a / JAM3* / Q9BX67* / Q9D8B7* / junctional adhesion molecule 3* / Junctional adhesion molecule C *  / complex / reaction
 ENSDARG00000016939 itgb2 / integrin, beta 2 / Itgb2l* / P05107* / Q3UV74* / integrin subunit beta 2* / Integrin beta-2-like protein *  / complex / reaction
 ENSDARG00000103056 itga4 / integrin alpha 4 / P13612* / integrin subunit alpha 4*  / complex / reaction






 

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