ENSDARG00000070618


Danio rerio

Features
Gene ID: ENSDARG00000070618
  
Biological name :tatdn2
  
Synonyms : TatD DNase domain containing 2 / tatdn2
  
Possible biological names infered from orthology : AC022384.1 / putative deoxyribonuclease TATDN2 isoform 1 / Q93075
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 40439858
Gene end: 40449399
  
Corresponding Affymetrix probe sets: Dr.6692.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000094655
Ensembl peptide - ENSDARP00000129626
Ensembl peptide - ENSDARP00000143970
Ensembl peptide - ENSDARP00000153822
NCBI entrez gene - 557931     See in Manteia.
RefSeq - NM_001128693
RefSeq - XM_005166043
RefSeq - XM_005166044
RefSeq Peptide - NP_001122165
swissprot - X1WHB4
swissprot - F1QY16
ZFIN ID - ZDB-GENE-081022-51
Ensembl - ENSDARG00000070618
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AC022384.1ENSG00000272410Homo sapiens
 Q93075ENSG00000157014Homo sapiens
 Tatdn2ENSMUSG00000056952Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tatdn1 / TatD DNase domain containing 1 / Q6P1N9*ENSDARG000000369246


Protein motifs (from Interpro)
Interpro ID Name
 IPR001130  TatD family
 IPR018228  Deoxyribonuclease, TatD-related, conserved site
 IPR032466  Metal-dependent hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006259 DNA metabolic process IEA
 biological_processGO:0006308 DNA catabolic process IBA
 molecular_functionGO:0004536 deoxyribonuclease activity IBA
 molecular_functionGO:0016788 hydrolase activity, acting on ester bonds IEA
 molecular_functionGO:0016888 endodeoxyribonuclease activity, producing 5"-phosphomonoesters IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr