ENSMUSG00000056952


Mus musculus

Features
Gene ID: ENSMUSG00000056952
  
Biological name :Tatdn2
  
Synonyms : putative deoxyribonuclease TATDN2 isoform 1 / Tatdn2
  
Possible biological names infered from orthology : AC022384.1 / Q93075 / TatD DNase domain containing 2
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: E3
Gene start: 113697050
Gene end: 113711069
  
Corresponding Affymetrix probe sets: 10540812 (MoGene1.0st)   1454769_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000108645
Ensembl peptide - ENSMUSP00000123557
Ensembl peptide - ENSMUSP00000145308
Ensembl peptide - ENSMUSP00000086412
Ensembl peptide - ENSMUSP00000116559
NCBI entrez gene - 381801     See in Manteia.
MGI - MGI:3576210
RefSeq - XM_006506335
RefSeq - NM_001033463
RefSeq Peptide - NP_001028635
RefSeq Peptide - NP_001334285
swissprot - F8VQE6
swissprot - F6W3K2
swissprot - B7ZNL9
swissprot - F7CWI0
Ensembl - ENSMUSG00000056952
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tatdn2ENSDARG00000070618Danio rerio
 AC022384.1ENSG00000272410Homo sapiens
 Q93075ENSG00000157014Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6P8M1 / Tatdn1 / Putative deoxyribonuclease TATDN1 / Q6P1N9* / TatD DNase domain containing 1*ENSMUSG000000508918


Protein motifs (from Interpro)
Interpro ID Name
 IPR001130  TatD family
 IPR018228  Deoxyribonuclease, TatD-related, conserved site
 IPR032466  Metal-dependent hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006259 DNA metabolic process IEA
 biological_processGO:0006308 DNA catabolic process IBA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0016607 nuclear speck ISO
 molecular_functionGO:0004536 deoxyribonuclease activity IBA
 molecular_functionGO:0016788 hydrolase activity, acting on ester bonds IEA
 molecular_functionGO:0016888 endodeoxyribonuclease activity, producing 5"-phosphomonoesters IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr