ENSDARG00000071113


Danio rerio

Features
Gene ID: ENSDARG00000071113
  
Biological name :xirp2a
  
Synonyms : xin actin binding repeat containing 2a / xirp2a
  
Possible biological names infered from orthology : A4UGR9 / Q4U4S6 / xin actin binding repeat containing 2 / XIRP2
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 10170241
Gene end: 10233650
  
Corresponding Affymetrix probe sets: Dr.21394.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000155983
Ensembl peptide - ENSDARP00000124303
Ensembl peptide - ENSDARP00000124135
NCBI entrez gene - 559746     See in Manteia.
RefSeq - XM_009302196
RefSeq - XM_005165785
RefSeq - XM_021477013
swissprot - F8W4U4
swissprot - F8W3Z4
ZFIN ID - ZDB-GENE-040108-7
Ensembl - ENSDARG00000071113
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 XIRP2ENSG00000163092Homo sapiens
 Xirp2ENSMUSG00000027022Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
xirp2b / xin actin binding repeat containing 2b / XIRP2* / Q4U4S6* / A4UGR9* / xin actin binding repeat containing 2*ENSDARG0000009109042
xirp1 / Q5PZ43 / xin actin binding repeat containing 1 / Q702N8*ENSDARG0000003072219


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR012510  Actin-binding, Xin repeat
 IPR030072  Xin actin-binding repeat-containing protein 1/2
 IPR030107  Xin actin-binding repeat-containing protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007507 heart development IEA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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